Protein Alignment Ref2 and YRA1

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_010669.1
• Gene: YRA1 / 851988
• SGDID: S000002789
• Length: 226
• Species: Saccharomyces cerevisiae
• Alignment Length: 230
• Identity: 64/230 - (27%)
• Similarity: 97/230 - (42%)
• Gaps: 42/230 - (18%)

  Fly     1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSE--GGLRGIQRSR--NGTGFIRKSK 61
            ||..:..|||:||    ..||   |.:.|.:.|..|.....  |...|.||..  |..|.|||:
Yeast     1 MSANLDKSLDEII----GSNK---AGSNRARVGGTRGNGPRRVGKQVGSQRRSLPNRRGPIRKN- 57

  Fly    62 FKQETLLKPPK------------KPTLVMVCNLDYGVDDDDIMELF-NQDGVVEKGFVHYDRDGN 113
                 ...||.            :...|.|..|...:..|.:.|.| :|.|.|::..:.|:..|.
Yeast    58 -----TRAPPNAVARVAKLLDTTREVKVNVEGLPRDIKQDAVREFFASQVGGVQRVLLSYNERGQ 117

  Fly   114 SLGTAHLSFKYREEAFQIIEQFHGVRLDG--RRLKLHLVQNTRNFKRTDVDDLSLRMGSFKTRFL 176
            |.|.|:::||..|.|.:.:|:|:|..:||  .||:|:|:.:.   .:..|..|:.|:.:..
Yeast   118 STGMANITFKNGELARRAVERFNGSPIDGGRSRLRLNLIVDP---NQRPVKSLADRIKAMP---- 175

  Fly   177 QNGTFKTRSLQNGFQKSRLFRNSSFKP---RPFKK 208
            |.|....|.::.|..:......|..||   :|.||
Yeast   176 QKGGNAPRPVKRGPNRKAAMAKSQNKPKREKPAKK 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	26/76 (34%)
YRA1	NP_010669.1	RRM_YRA1_MLO3	78..156	CDD:409711	26/77 (34%)