Protein Alignment Ref2 and POLDIP3

DIOPT Version :9

• Sequence 1: NP_001246007.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001265586.1
• Gene: POLDIP3 / 84271
• HGNCID: 23782
• Length: 438
• Species: Homo sapiens
• Alignment Length: 117
• Identity: 32/117 - (27%)
• Similarity: 54/117 - (46%)
• Gaps: 24/117 - (20%)

  Fly    49 RSRNGTGFIRKSKFKQETLLKPPK-----KPTL-------VMVCNLDYGVDDDDIMELFNQDGVV 101
            |::..|...|....|:|    |||     :|.|       :.|.||...|.::||:|||...|.:
Human   263 RTKALTNMSRTLVNKEE----PPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGAL 323

  Fly   102 EKG-FVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLVQN 152
            ::. .||       .|.|.:.|..:::|....::::...|||:.:|.:|..|
Human   324 KRARLVH-------PGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMN 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_001246007.1	RRM	2..>198	CDD:223796	32/117 (27%)
		RRM_SF	75..149	CDD:302621	21/81 (26%)
POLDIP3	NP_001265586.1	RRM_SKAR	297..365	CDD:241125	20/74 (27%)
		RRM	<301..424	CDD:223796	22/75 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR19965
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	3	2.910