Protein Alignment Ref2 and SR45

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001185014.1
• Gene: SR45 / 838230
• AraportID: AT1G16610
• Length: 425
• Species: Arabidopsis thaliana
• Alignment Length: 150
• Identity: 33/150 - (22%)
• Similarity: 55/150 - (36%)
• Gaps: 37/150 - (24%)

  Fly    34 SIRKRNSEGGLRGIQRSRNGTGFIRKSKFKQETL---------------------LKPPKKP--- 74
            |.|.|:.....|.|.|||:.:..:..|.....::                     ..||..|
plant    21 SSRSRSGSSPSRSISRSRSRSRSLSSSSSPSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKG 85

  Fly    75 -----------TLVM-VCNLDYGVDDDDIMELFNQDGVVEKGFVHYDRDGN-SLGTAHLSFKYRE 126
                       :||: |.:|...|::..:.|:|...|.|....:..||..| ..|..::.||.|.
plant    86 ASSPSKKAVQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARA 150

  Fly   127 EAFQIIEQFHGVRLDGRRLK 146
            :|.:......|.::||:.:|
plant   151 DAEKAQLYMDGAQIDGKVVK 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	20/73 (27%)
SR45	NP_001185014.1	RRM_RNPS1	100..172	CDD:409800	18/70 (26%)