DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ref2 and AT5G59950

DIOPT Version :9

Sequence 1:	NP_001246007.1	Gene:	Ref2 / 34667	FlyBaseID:	FBgn0032439	Length:	220	Species:	Drosophila melanogaster
Sequence 2:	NP_001190572.1	Gene:	AT5G59950 / 836117	AraportID:	AT5G59950	Length:	245	Species:	Arabidopsis thaliana

Alignment Length:	182	Identity:	53/182 - (29%)
Similarity:	86/182 - (47%)	Gaps:	51/182 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNGTGFIRKSKFKQE 65
            ||..:.|||||:|           |||.:.:||:       |..|| ..|.:|.|..|::...::
plant     1 MSTGLDMSLDDMI-----------AKNRKSRGGA-------GPARG-TGSGSGPGPTRRNNPNRK 46

  Fly    66 TLLKPP----KKP----------------------------TLVMVCNLDYGVDDDDIMELFNQD 98
            :....|    |.|                            |.:.:.||||||.::||.|||.:.
plant    47 STRSAPYQSAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEV 111

  Fly    99 GVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLV 150
            |.:::..||:||.|.|.|||.:.:..|.:|...:::::.|:|||:.:|:.:|
plant   112 GELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIV 163

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_001246007.1	RRM	2..>198	CDD:223796	52/181 (29%)
Ref2	NP_001246007.1	RRM_SF	75..149	CDD:302621	29/73 (40%)
AT5G59950	NP_001190572.1	RRM_THOC4	88..162	CDD:410081	29/73 (40%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1369069at2759
OrthoFinder	1	1.000	-	-		FOG0001223
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101458
Panther	1	1.100	-	-	O	PTHR19965
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	6	5.870