Protein Alignment Ref2 and ALY4

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_198588.2
• Gene: ALY4 / 833750
• AraportID: AT5G37720
• Length: 288
• Species: Arabidopsis thaliana
• Alignment Length: 214
• Identity: 63/214 - (29%)
• Similarity: 99/214 - (46%)
• Gaps: 47/214 - (21%)

  Fly     1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSI---RKRNSEGGLRGIQRSRNGTGFI--RKS 60
            ||..:.|:||:|:|         ..|..|..|..|   |.|...||.||...:|.|...:  |.|
plant     1 MSGALNMTLDEIVK---------RGKTARSGGRGISRGRGRGRGGGGRGAGPARRGPLAVNARPS 56

  Fly    61 KFKQETLLKPPKK-------------------------PTLVMVCNLDYGVDDDDIMELFNQDGV 100
            .|   |:.||.::                         .|.:.|.|||.||.::||.|||::.|.
plant    57 SF---TINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGE 118

  Fly   101 VEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLVQNTRNFK-----RTD 160
            ||:..:|||::|...|||.:.:..|.:|||.:::::.|.||||.::|.::....:.:     |.:
plant   119 VERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSEAPLSGRVN 183

  Fly   161 VDDLSLRMGSFKTRFLQNG 179
            |:...|.....:|..:|.|
plant   184 VNVTGLNGRLKRTVVIQQG 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	32/73 (44%)
ALY4	NP_198588.2	RRM_THOC4	93..167	CDD:410081	32/73 (44%)