DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ref2 and AT5G02530

DIOPT Version :9

Sequence 1:	NP_001246007.1	Gene:	Ref2 / 34667	FlyBaseID:	FBgn0032439	Length:	220	Species:	Drosophila melanogaster
Sequence 2:	NP_195873.2	Gene:	AT5G02530 / 831923	AraportID:	AT5G02530	Length:	292	Species:	Arabidopsis thaliana

Alignment Length:	269	Identity:	72/269 - (26%)
Similarity:	108/269 - (40%)	Gaps:	76/269 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQG-GSIRKRNSEGGLRGIQRSRNGTGFIRKSKFKQ 64
            ||..:.||||||||.        |.|....:| |.|...|:.||..|   |.:.:|..|:...:.
plant     1 MSGGLDMSLDDIIKS--------NRKPTGSRGRGGIGGGNNTGGRGG---SGSNSGPSRRFANRV 54

  Fly    65 ETLLKPPKKP-------------------------------------------TLVMVCNLDYGV 86
            .....|..:|                                           |.:.:.||||||
plant    55 GARTAPYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGV 119

  Fly    87 DDDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLVQ 151
            .::||.|||::.|.:::..:||||.|.|.|||.:.|..|.:|...:::::.|:|||:.:|:.:|.
plant   120 SNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIVG 184

  Fly   152 NTRNFKRTDVDDLSLR---------MGSFKTRFLQNGTFKTRSLQNGFQKSRLFRNSSFKPRP-- 205
            .  |.....:..|:..         :|:|...|  ||.|....  ||..:.|  ....|..||
plant   185 T--NLSAPALPILATAQIPFPTNGILGNFNENF--NGNFNGNF--NGNFRGR--GRGGFMGRPRG 241

  Fly   206 --FKKHNFK 212
              |...||:
plant   242 GGFGGGNFR 250

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_001246007.1	RRM	2..>198	CDD:223796	65/248 (26%)
Ref2	NP_001246007.1	RRM_SF	75..149	CDD:302621	30/73 (41%)
AT5G02530	NP_195873.2	RRM_THOC4	108..182	CDD:410081	30/73 (41%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1369069at2759
OrthoFinder	1	1.000	-	-		FOG0001223
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101458
Panther	1	1.100	-	-	O	PTHR19965
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	6	5.870