Protein Alignment Ref2 and AT2G46780

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_182201.4
• Gene: AT2G46780 / 819291
• AraportID: AT2G46780
• Length: 336
• Species: Arabidopsis thaliana
• Alignment Length: 152
• Identity: 36/152 - (23%)
• Similarity: 62/152 - (40%)
• Gaps: 21/152 - (13%)

  Fly    73 KPTLVMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYDRD-GNSLGTAHLSFKYREEAFQIIEQFH 136
            |.|.:.|..|.:....|.:...|.|.|.:.:..|..|:: |.|.|...::||..|.|.:..:..:
plant    20 KLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQNMN 84

  Fly   137 GVRLDGRRLKLHL----VQNTRNFKRTDVDDLSLRMGSFKTRFLQNGT--------FKTRSLQNG 189
            .| :||||...:|    .|..|       ...|.|.|:.:.|...:|.        |:..|..:.
plant    85 PV-IDGRRANCNLACLGAQKPR-------PPTSPRHGTGRFRSPGSGVGLVAPSPQFRGSSSSSA 141

  Fly   190 FQKSRLFRNSSFKPRPFKKHNF 211
            |...:..::::..|.|:..:.|
plant   142 FVHQQQQQHTAQFPFPYSTYGF 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	21/74 (28%)
AT2G46780	NP_182201.4	RRM_RBM24_RBM38_like	22..97	CDD:409818	21/75 (28%)
		PABP-1234	<38..252	CDD:130689	31/134 (23%)