Protein Alignment Ref2 and Alyreffm14

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001257828.1
• Gene: Alyreffm14 / 627488
• MGIID: 3643573
• Length: 264
• Species: Mus musculus
• Alignment Length: 178
• Identity: 52/178 - (29%)
• Similarity: 79/178 - (44%)
• Gaps: 50/178 - (28%)

  Fly     1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSE------------------------ 41
            |:|||.|||:||||:...:.:..:..:.||..|:..||...
Mouse     4 MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQ 68

  Fly    42 -----GGLRGIQRSRNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLDYGVDDDDIMELFNQDGVV 101
                 ||.||  ::...||                   ..:.:.||.:||.|.||..||.:.|.:
Mouse    69 HDLFIGGFRG--QNHVDTG-------------------GKLFLSNLHFGVSDADIQLLFAEFGTL 112

  Fly   102 EKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHL 149
            :|..|||||.|.|||||.:.|:.:.:|.:.:.:::|..||||.:.:.|
Mouse   113 KKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQL 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	29/73 (40%)
Alyreffm14	NP_001257828.1	hnRNP-R-Q	<26..>179	CDD:273732	41/156 (26%)
		RRM_THOC4	86..160	CDD:410081	29/73 (40%)