DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ref2 and eif3g

DIOPT Version :10

Sequence 1:NP_609574.1 Gene:Ref2 / 34667 FlyBaseID:FBgn0032439 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001016749.1 Gene:eif3g / 549503 XenbaseID:XB-GENE-6070198 Length:310 Species:Xenopus tropicalis


Alignment Length:162 Identity:38/162 - (23%)
Similarity:63/162 - (38%) Gaps:41/162 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQ------GGSIRKRNSEGGLRGIQRSRNGTGFIRK 59
            :::::.:|..|       |.|...|:.|..|      |..:.....:||      ||.|..    
 Frog   171 LAEQLGLSTGD-------KEKAPGAEPEPAQAPVSKTGKYVPPSLRDGG------SRRGES---- 218

  Fly    60 SKFKQETLLKPPKKP---TLVMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYDR-DGNSLGTAHL 120
                    ::|.::.   ..:.|.||.....:.|:.|||...|.:.:.::..|: .|.|.|.|.:
 Frog   219 --------MQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 275

  Fly   121 SFKYREEAFQIIEQFHGVRLDGRRLKLHLVQN 152
            ||..||:|.:.|....|...|      ||:.|
 Frog   276 SFHRREDAARAIAGVSGFGYD------HLILN 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ref2NP_609574.1 RRM_SF 75..149 CDD:473069 21/74 (28%)
eif3gNP_001016749.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
eIF3G 53..162 CDD:240597
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..229 13/74 (18%)
RRM_eIF3G_like 230..305 CDD:409842 24/78 (31%)
Blue background indicates that the domain is not in the aligned region.

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