Protein Alignment Ref2 and Tra2a

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001119768.2
• Gene: Tra2a / 500116
• RGDID: 1562563
• Length: 282
• Species: Rattus norvegicus
• Alignment Length: 145
• Identity: 34/145 - (23%)
• Similarity: 67/145 - (46%)
• Gaps: 20/145 - (13%)

  Fly    14 KMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNGTGFIRKSKFKQETLLK--------- 69
            |.:....:..:.:..|.:..|.|:|:         |||:.|...|:.:.:..:.:.
  Rat    55 KSRSRSRRHSHRRYTRSRSHSHRRRS---------RSRSYTPEYRRRRSRSHSPMSNRRRHTGSR 110

  Fly    70 -PPKKPTLVMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYD-RDGNSLGTAHLSFKYREEAFQII 132
             .|...|.:.|..|.....:.|:.|:|::.|.:....|.|| |.|.|.|.|.:.|:..:::.:.:
  Rat   111 ANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAM 175

  Fly   133 EQFHGVRLDGRRLKL 147
            |:.:|:.|||||:::
  Rat   176 ERANGMELDGRRIRV 190

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	23/74 (31%)
Tra2a	NP_001119768.2	RRM_TRA2	116..195	CDD:409798	23/75 (31%)