DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ref2 and LOC4576120

DIOPT Version :10

Sequence 1:NP_609574.1 Gene:Ref2 / 34667 FlyBaseID:FBgn0032439 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_001237182.4 Gene:LOC4576120 / 4576120 VectorBaseID:AGAMI1_010017 Length:498 Species:Anopheles gambiae


Alignment Length:96 Identity:28/96 - (29%)
Similarity:45/96 - (46%) Gaps:13/96 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 PPKKPTL-----VMVCNLDYGVDDDDIMELFNQDG-VVEKGFVHYDRDGNSLGTAHLSFKYREEA 128
            ||..|||     ::|.||...|...||.|||...| ::|...|.       .|.|.:.::..::|
Mosquito   398 PPPPPTLTTGYRIVVSNLHPSVTQLDIKELFEDIGDLLESRLVR-------PGIAEVIYRNLKDA 455

  Fly   129 FQIIEQFHGVRLDGRRLKLHLVQNTRNFKRT 159
            .:.::.:|..:|||:.:...||.....:|.|
Mosquito   456 ERAVDAYHNRQLDGQPMNCLLVNPRATYKPT 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ref2NP_609574.1 RRM_SF 75..149 CDD:473069 21/79 (27%)
LOC4576120XP_001237182.4 None

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