DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ref2 and rbm14b

DIOPT Version :10

Sequence 1:NP_609574.1 Gene:Ref2 / 34667 FlyBaseID:FBgn0032439 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_021333123.2 Gene:rbm14b / 402858 ZFINID:ZDB-GENE-040426-2455 Length:560 Species:Danio rerio


Alignment Length:116 Identity:36/116 - (31%)
Similarity:48/116 - (41%) Gaps:22/116 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EGGLRGIQRSRNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLDYGVDDDDIMELFNQDG-VVE-- 102
            ||......|..||..|..::...:|:..: |...|.|.|.||......:|:.|||...| |:|  
Zfish    50 EGAAERAIRELNGREFKGRNLVVEESRGR-PLHSTKVFVGNLSSMCTTEDLQELFQTFGKVLECD 113

  Fly   103 --KG--FVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHL 149
              ||  |||.:.              :|:|.|.||..||....||.|.:.|
Zfish   114 KVKGYAFVHMEN--------------KEDALQAIEALHGTSFKGRPLSVEL 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ref2NP_609574.1 RRM_SF 75..149 CDD:473069 27/80 (34%)
rbm14bXP_021333123.2 None

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