Protein Alignment Ref2 and tra2b

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_957491.1
• Gene: tra2b / 394172
• ZFINID: ZDB-GENE-040426-1094
• Length: 278
• Species: Danio rerio
• Alignment Length: 153
• Identity: 37/153 - (24%)
• Similarity: 68/153 - (44%)
• Gaps: 26/153 - (16%)

  Fly    79 VCNLDYGVDDDDIMELFNQDGVVEKGFVHYDRDG-NSLGTAHLSFKYREEAFQIIEQFHGVRLDG 142
            |..|.....:.|:.|:|::.|.:....:.||:.. .|.|.|.:.|:.||::.:..|:.:|:.|||
Zfish   127 VFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFALVYFENREDSKEAKERANGMELDG 191

  Fly   143 RRLK---------------LHLVQNTRN-----FKRTDVDDLSLRMG--SFKTRFLQNGTFKTRS 185
            ||::               :::.:.|..     .:|.|..|.....|  |::.|...|...::.|
Zfish   192 RRIRVDYSITKGPHTPTPGIYMGRPTYGGGPSVSRRRDSYDRGYERGYDSYEDRDYHNNRRRSPS 256

  Fly   186 --LQNGFQKSRLFRNSSFKPRPF 206
              ...|..:|| .|:.|:.||.:
Zfish   257 PYYSRGPYRSR-SRSRSYSPRHY 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	21/85 (25%)
tra2b	NP_957491.1	SF-CC1	23..>199	CDD:273721	21/71 (30%)
		RRM_TRA2B	116..202	CDD:410046	21/74 (28%)