Protein Alignment Ref2 and tra2a

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_956710.1
• Gene: tra2a / 393388
• ZFINID: ZDB-GENE-040426-1391
• Length: 297
• Species: Danio rerio
• Alignment Length: 245
• Identity: 53/245 - (21%)
• Similarity: 92/245 - (37%)
• Gaps: 53/245 - (21%)

  Fly    14 KMKFNKNKFVNAKNERVQGGSIRKRN-----SEGGLRGIQRSRNGTGFIRKSKFKQETLLKPPKK 73
            |.:....:..|.:..|.:..|.||::     |....|...||.:.....||....:.:.....||
Zfish    55 KSRSRSRRHSNRRYSRSRSHSHRKKSRSRSYSPESRRRRSRSASPNSNRRKHAGSRSSYSHDSKK 119

  Fly    74 P--------------TLVMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYD-RDGNSLGTAHLSFK 123
            .              |.:.|..|.....:.|:.|:|::.|.:....|.|| |.|.|.|.|.:.|:
Zfish   120 DSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFE 184

  Fly   124 YREEAFQIIEQFHGVRLDGRRLKLHLVQNTRNFKRTDVDDLSLRMGSFKTRFLQNG--------- 179
            :.::|.:.:|:.:|:.|||||:::......|....|.        |.:..|...||
Zfish   185 HIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTP--------GIYMGRPTHNGGGGGGGGSS 241

  Fly   180 -------TFKTRSLQNGFQKS------RLFRNSSFKPRP-FKKHNFKSRA 215
                   ::..|....|:.:.      |..|..|  |.| :.::..:||:
Zfish   242 SGGRRRDSYYDRGYDRGYDRGYDEYDYRYSRRRS--PSPYYSRYRSRSRS 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	24/74 (32%)
tra2a	NP_956710.1	RRM_TRA2	134..213	CDD:409798	24/78 (31%)