Protein Alignment Ref2 and srsf5a

DIOPT Version :9

• Sequence 1: NP_001246007.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_957161.1
• Gene: srsf5a / 335396
• ZFINID: ZDB-GENE-030131-7336
• Length: 259
• Species: Danio rerio
• Alignment Length: 201
• Identity: 52/201 - (25%)
• Similarity: 87/201 - (43%)
• Gaps: 13/201 - (6%)

  Fly    23 VNAK---NERVQGGSIRKRNSEGGLRGI-QRSRNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLD 83
            :|.|   :|||.....|.|...||..|: .|.....|..|:|:........|.:....::|.||.
Zfish    57 LNGKELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVENLS 121

  Fly    84 YGVDDDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLH 148
            ..:...|:.:|..:.|  |..||...|...:.|.  :.|....:....||:..|..|:||:|||:
Zfish   122 SRISWQDLKDLMRKVG--EVTFVDAHRTKKNEGV--VEFASHSDMKNAIEKLDGTDLNGRKLKLY 182

  Fly   149 L-VQNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRS---LQNGFQKSRLFRNSSFKPRPFKKH 209
            . .:..|:..|:.....|......::|..:.|:.::||   .:...:||...|:.|..|.|.:|.
Zfish   183 EDRKRNRSRSRSRSRSSSRSRSPSRSRSPERGSKRSRSRSLSRTPEKKSTSNRSPSRSPTPQRKQ 247

  Fly   210 NFKSRA 215
            : :||:
Zfish   248 S-RSRS 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_001246007.1	RRM	2..>198	CDD:223796	45/182 (25%)
		RRM_SF	75..149	CDD:302621	21/73 (29%)
srsf5a	NP_957161.1	RRM1_SRSF4_like	5..72	CDD:240783	5/14 (36%)
		RRM2_SRSF4_like	113..184	CDD:241044	21/74 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	0	0.000