DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ref2 and safb

DIOPT Version :10

Sequence 1:NP_609574.1 Gene:Ref2 / 34667 FlyBaseID:FBgn0032439 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_073792392.1 Gene:safb / 321979 ZFINID:ZDB-GENE-030131-698 Length:888 Species:Danio rerio


Alignment Length:262 Identity:54/262 - (20%)
Similarity:88/262 - (33%) Gaps:59/262 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DIIKMKFNKNKFVNAKNERVQGGSIRKRN--------SEGGLRGIQ------------------- 48
            ||:..|.::.:..|...|.:|...:...|        ||.|||.|:                   
Zfish   310 DIVASKESEVELTNKDQENIQDSLVDAENTSAQADNASETGLRDIESAVDSEMASKGEAVEECKS 374

  Fly    49 ---------RSRNGTGFIRKSKFKQETLLKPPKKPTL--------VMVCNLDYGVDDDDIMELFN 96
                     :..:..|..:|...:::...||..|...        :.|..|.......|:..||:
Zfish   375 TDPAESSEVKESSVQGDDQKKSEEEDASTKPESKDDKGGASSGRNLWVSGLSSTTRATDLKNLFS 439

  Fly    97 QDG-VVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLVQN-------- 152
            :.| ||....|...|...:.....::....|||.:.|...|...|.||.:.:...:|        
Zfish   440 KYGKVVGAKVVTNARSPGARCYGFVTMCSIEEATKCISHLHRTELHGRMISVERAKNEPAGKKPA 504

  Fly   153 TRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRSLQNGFQKSRLFRNSSFKP-----RPFKKHNFK 212
            .:|..:..|.|..|...| ||...:|...||.....|.:::.:...|..:|     ...|:.:.|
Zfish   505 DKNDAKKSVSDRRLSSDS-KTDKSENKDEKTEGDGKGGERTVVMDKSKGEPVISLKTKSKERSSK 568

  Fly   213 SR 214
            ||
Zfish   569 SR 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ref2NP_609574.1 RRM_SF 75..149 CDD:473069 18/82 (22%)
safbXP_073792392.1 None

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