Protein Alignment Ref2 and mlo3

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_595715.1
• Gene: mlo3 / 2540565
• PomBaseID: SPBC1D7.04
• Length: 199
• Species: Schizosaccharomyces pombe
• Alignment Length: 235
• Identity: 53/235 - (22%)
• Similarity: 85/235 - (36%)
• Gaps: 57/235 - (24%)

  Fly     1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNGTGFIRKSKFKQE 65
            ||.::..|||.||..|              ..|.||||.:                 |.:|.|..
pombe     1 MSMELDQSLDAIIASK--------------PKGGIRKRRA-----------------RSNKPKPT 34

  Fly    66 TLLKPP-----------KKPTLVMVCNLDYGVDDDDIMELFNQD-GVVEKGFVHYDRDGNSLGTA 118
            ...||.           .:.:.::|.||...|.:..:.|||.:. |..::..:.|..:|.|.|.|
pombe    35 KNAKPAVNTASALKSVISEESKIIVSNLPTDVTEAQVKELFVKSIGPCKRVSLAYGPNGRSKGIA 99

  Fly   119 HLSFKYREEAFQIIEQFHGVRLDG-RRLKLHLVQNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFK 182
            .:.|....:|.:..||:.|..:|| |::|:.::.           |.|.::.|...|........
pombe   100 TIIFSRPGDATRAYEQYEGRLVDGTRKMKVEIIL-----------DPSRQLNSLAARVSPASNAS 153

  Fly   183 TRSLQNGFQ--KSRLFRNSSFKPRPFKKHNFKSRAFDTDF 220
            ..:.:||.:  |.:..|......||.|......:..|..|
pombe   154 ATASKNGAKSSKRKTTRRRRTPNRPKKSAEELDKEMDDYF 193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	22/75 (29%)
mlo3	NP_595715.1	RRM_YRA1_MLO3	55..132	CDD:409711	22/76 (29%)