Protein Alignment Ref2 and aly-1

DIOPT Version :9

• Sequence 1: NP_001246007.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_501588.1
• Gene: aly-1 / 177735
• WormBaseID: WBGene00000120
• Length: 223
• Species: Caenorhabditis elegans
• Alignment Length: 147
• Identity: 34/147 - (23%)
• Similarity: 65/147 - (44%)
• Gaps: 9/147 - (6%)

  Fly    28 ERVQGGSIRKRNSEG----GLRGIQRSRNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLDYGVDD 88
            :|...|.::||.|.|    ..|...:.|..:|.||.   ...::.....:...:.:.||.:.|..
 Worm    24 KRASVGGVKKRFSTGTAGPSRRPTAQPRRQSGGIRT---VDRSIPANENREVRINLSNLAHTVHS 85

  Fly    89 DDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLVQNT 153
            .|:.:|| .:..:....|:::..|..:||..::...| .|.::|::|.||.|||:.:|..::.:.
 Worm    86 GDLRQLF-AEFKIRNVSVNFNEHGKPVGTGDVTLPKR-HADRLIQKFAGVSLDGKEIKFAIIDSA 148

  Fly   154 RNFKRTDVDDLSLRMGS 170
            ....|....:...|..|
 Worm   149 NIANRVKFPEAPRRAPS 165

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_001246007.1	RRM	2..>198	CDD:223796	34/147 (23%)
		RRM_SF	75..149	CDD:302621	20/73 (27%)
aly-1	NP_501588.1	RRM_SF	73..144	CDD:388407	20/72 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1369069at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101458
Panther	1	1.100	-	-	O	PTHR19965
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	6	5.780