Protein Alignment Ref2 and tiar-1

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_495121.1
• Gene: tiar-1 / 173967
• WormBaseID: WBGene00015943
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 139
• Identity: 38/139 - (27%)
• Similarity: 59/139 - (42%)
• Gaps: 23/139 - (16%)

  Fly    73 KPTLVMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHG 137
            :|..:.|.|||..|.:|.|..||||.|.|.|..|.:  ||::...|.:.|....:|.|.::..:.
 Worm    44 EPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIF--DGSNDPYAFVEFSDHGQASQALQTMNK 106

  Fly   138 VRLDGRRLKLH----------LVQNTRNFK------RTDVDDLSLR-----MGSFKTRFLQNGTF 181
            ..|..|.:|::          .:..||:|.      .::||:..||     .|......:...|.
 Worm   107 RLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTN 171

  Fly   182 KTRSLQNGF 190
            .|:|...||
 Worm   172 TTKSKGYGF 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	24/83 (29%)
tiar-1	NP_495121.1	PABP-1234	47..>302	CDD:130689	37/136 (27%)
		RRM2_TIA1_like	136..210	CDD:409789	10/45 (22%)