DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ref2 and LOC1280775

DIOPT Version :10

Sequence 1:NP_609574.1 Gene:Ref2 / 34667 FlyBaseID:FBgn0032439 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_320641.5 Gene:LOC1280775 / 1280775 VectorBaseID:AGAMI1_011475 Length:642 Species:Anopheles gambiae


Alignment Length:193 Identity:46/193 - (23%)
Similarity:80/193 - (41%) Gaps:48/193 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KSKFKQETLLKPPKKPTLVMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYDR-DGNSLGTAHLSF 122
            |:|.|||. ....::...|.|.||.|.|:.:::.|:.:|.|:|||..::.:| .|:|.|||.:.|
Mosquito   201 KAKIKQEN-RNEVEEGREVFVKNLPYDVEANELKEIMSQFGIVEKVLINRERISGHSKGTAFVIF 264

  Fly   123 KYREEA---------FQIIEQFHGVR--------LDGRRLKLH-LVQNTRNF------------- 156
            |.::.|         .::.:|:..:.        ||..:.|.. ..:::||.             
Mosquito   265 KLKDSAQLSCRQSLKLKVHDQYAEIMPALRKKDILDREKAKQEKRAKDSRNLYLLKEGLIMAGSP 329

  Fly   157 --KRTDVDDLS--LRMGSFKTRFLQN-GTFKTR----------SLQNGFQKSRLFRNSSFKPR 204
              |.....|:|  ||:.......|:| ..|..|          |..|...:..:...:|::||
Mosquito   330 AAKGVSQSDMSQRLRLEQRSNEILKNFNRFVARDRLTIHNIPQSYTNEDLRKMIINFTSYRPR 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ref2NP_609574.1 RRM_SF 75..149 CDD:473069 25/92 (27%)
LOC1280775XP_320641.5 None

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