Protein Alignment Ref2 and Cirbp

DIOPT Version :10

• Sequence 1: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001366350.1
• Gene: Cirbp / 12696
• MGIID: 893588
• Length: 176
• Species: Mus musculus
• Alignment Length: 133
• Identity: 30/133 - (22%)
• Similarity: 60/133 - (45%)
• Gaps: 14/133 - (10%)

  Fly    77 VMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYDRD-GNSLGTAHLSFKYREEAFQIIEQFHGVRL 140
            :.|..|.:..::..:.::|::.|.:.:..|..||: ..|.|...::|:..::|...:...:|..:
Mouse     8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72

  Fly   141 DGRRLKLHLVQNTRNFKRTDVDDLSLRMGSFKTR-FLQNGTFKTRSLQNGFQK---SRLFRNSSF 201
            |||::::     .:..|.:|......|.||...| |.:.|    ||...||.:   .|.:....|
Mouse    73 DGRQIRV-----DQAGKSSDNRSRGYRGGSAGGRGFFRGG----RSRGRGFSRGGGDRGYGGGRF 128

  Fly   202 KPR 204
            :.|
Mouse   129 ESR 131

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	15/72 (21%)
Cirbp	NP_001366350.1	RRM_CIRBP_RBM3	6..85	CDD:409883	15/81 (19%)