DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5418 and URH1

DIOPT Version :10

Sequence 1:NP_609571.1 Gene:CG5418 / 34663 FlyBaseID:FBgn0032436 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_010688.4 Gene:URH1 / 852009 SGDID:S000002808 Length:340 Species:Saccharomyces cerevisiae


Alignment Length:304 Identity:69/304 - (22%)
Similarity:100/304 - (32%) Gaps:120/304 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DCDIGTDDAWALALLLRGEQLSLASGRRYKLIAITCVQGNTDVVNGAQNALKILRLL-ERRDVPV 78
            |||.|.||  |:|:||.      .....:.|:.|:...||....|...||..:|..: :.:.:||
Yeast    11 DCDPGHDD--AIAILLG------CFHPAFNLLGISTCFGNAPPENTDYNARSLLTAMGKAQAIPV 67

  Fly    79 FRGCANPIVTRTWL-------DISRFHGTDGLNDIGGYPDVSDLQEQLQQEHAVNAMYRLVCQYP 136
            ::|...|     |.       ||   ||..||:.....|  ....|....:..:.|:...:....
Yeast    68 YKGAQRP-----WKREPHYAPDI---HGISGLDGTSLLP--KPTFEARTDKTYIEAIEEAILANN 122

  Fly   137 KQVDFLLCGPLTNFASCINLYGDDFLDK-IGGIFIMGGNIYGRGNIMKC-----AEFNFMMDPEA 195
            .::.|:..|.||..|:....  ..:|.| :..|.||||.::|.||   |     ||||..:||:|
Yeast   123 GEISFVSTGALTTLATVFRC--KPYLKKSVKYISIMGGGLHGLGN---CNPNLSAEFNVWIDPDA 182

  Fly   196 A---------------------HTTLERLKV---------------------------------- 205
            |                     |..:...||                                  
Yeast   183 ANYIFRDPDVKDKCIVVPLNLTHKAIATYKVNEMIYNEKNNSKLRELFLELFQFFAHTYKDMQGF 247

  Fly   206 --------PAVILP------WEPS--------------IDDDFN 221
                    |..::|      |:||              |||.||
Yeast   248 ESGPPIHDPVALMPLLEFYGWDPSSAVGFRYKRMDISCIDDVFN 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5418NP_609571.1 nuc_hydro_CeIAG 10..332 CDD:239115 69/304 (23%)
URH1NP_010688.4 nuc_hydro_IU_UC_XIUA 7..330 CDD:239117 69/304 (23%)

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