DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5418 and NSH3

DIOPT Version :10

Sequence 1:NP_609571.1 Gene:CG5418 / 34663 FlyBaseID:FBgn0032436 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_197387.1 Gene:NSH3 / 832004 AraportID:AT5G18860 Length:890 Species:Arabidopsis thaliana


Alignment Length:382 Identity:97/382 - (25%)
Similarity:142/382 - (37%) Gaps:119/382 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVFDCDIGTDDAWALALLLR--GEQLSLASGRRYKLIAITCVQGNTDVVNGAQNALKI------L 68
            ||||.|:...|..:|..||:  .:::.|      |.|.::        ..|..||..|      |
plant   511 VVFDMDMSAGDFLSLFYLLKVPVDKIDL------KAIIVS--------PTGWANAATIDVVYDLL 561

  Fly    69 RLLERRDVPVF---------------------------RGCANPIVTRTWLDISRFHG------- 99
            .::.|.|:||.                           |||..      :||....:|       
plant   562 HMMGRDDIPVGLGDMLALNQSDPIFPPVGGCKYVKAIPRGCGG------FLDSDTLYGLARDLPR 620

  Fly   100 -----TDGLNDIGGYPDVSDLQEQLQQEHAVNAMYRLV--CQYPKQVDFLLCGPLTNFASCINLY 157
                 |...:...|.|..:| :.:|:|..|:.....|.  .....::..|..|||||.|..|:  
plant   621 SPRRYTAENSVTHGAPRDTD-RPELRQPLAIEVWQNLTKSGNGVSKITVLTNGPLTNLAKIIS-- 682

  Fly   158 GDDFLDK-----IGGIFIMGGNI----YGRGNIMKC-----AEFNFMMDPEAAHTTLE-RLKVPA 207
                .||     |..::|:||:|    ..:|||...     ||||..:||.||.|.|| .|.:..
plant   683 ----SDKKSSSLIKEVYIVGGHINREKSDKGNIFTIPSNAYAEFNMFLDPLAAKTVLESALNITL 743

  Fly   208 VILPWEPSIDDDFNLSLDWRLDVLGSVDHPLVELLSR-VERSMLVPRDIKHWINPDAALAA---- 267
            |.|..:..: ..|...|| ||  ..|...|....:.| :.|...:.:..:.:.:.|..|..    
plant   744 VPLATQHKL-SSFQTMLD-RL--YSSTKTPEARFVKRLLVRLQALHQKHRRYTHIDMFLGEVLGA 804

  Fly   268 -------AYIFPKAMIAEQLDYHATVELAGVHTR-GQMVLDHLRGR------RVDAI 310
                   |.:.|| |.||    |..|...|..:| |::::|.|||:      |||.|
plant   805 VLLGGDDASLKPK-MRAE----HIKVIAEGDESRDGKILIDKLRGKQIKILERVDLI 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5418NP_609571.1 nuc_hydro_CeIAG 10..332 CDD:239115 97/382 (25%)
NSH3NP_197387.1 nuc_hydro_TvIAG 46..396 CDD:239113
nuc_hydro_TvIAG 509..867 CDD:239113 97/382 (25%)
Blue background indicates that the domain is not in the aligned region.

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