DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5418 and urh1

DIOPT Version :10

Sequence 1:NP_609571.1 Gene:CG5418 / 34663 FlyBaseID:FBgn0032436 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_595062.1 Gene:urh1 / 2540168 PomBaseID:SPBC1683.06C Length:310 Species:Schizosaccharomyces pombe


Alignment Length:356 Identity:91/356 - (25%)
Similarity:137/356 - (38%) Gaps:77/356 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVFDCDIGTDDAWALALLLRGEQLSLASGRRYKLIAITCVQGNTDVVNGAQNALKILRLLERRDV 76
            ::.|.|.|.|||....|.:...::        :|:.:|.|.||..|....:|||::|.|..|.|:
pombe     3 IIIDTDPGQDDAITALLAIASPEI--------ELLGVTTVAGNVPVSMTTRNALQMLDLAGRPDI 59

  Fly    77 PVFRGCANPIVTRTWLDISRFHGTDGLNDIGGYPDVSDLQEQLQQEHAVNAMY-RLVCQYPKQVD 140
            ||:.|...|:: |..:..:..||..|..  |........:|  .:.|||:.:. .|....|..:.
pombe    60 PVYAGSNKPLL-RAPITATHVHGASGFE--GAVLPPPSRKE--NEGHAVDFIIDTLRNNEPGTIT 119

  Fly   141 FLLCGPLTNFASCINLYGDDFLDKIGGIFIMGGNIYGRGNIMKCAEFNFMMDPEAAHTTLERLKV 205
            ....|||||.|..:| ...:.:.:...|.:|.|.....|||...||||..:||.||...|.. .:
pombe   120 ICTIGPLTNIALALN-KAPEVIQRAKQIVMMAGAFSEVGNITPAAEFNIYVDPHAAQMVLSS-GI 182

  Fly   206 PAVILPWEPSIDDDFNLSLDWRLDVLGSVDHPLVELLSRVERSMLVPRDIKHWINPDAALAAAYI 270
            |.|::|                ||    :.|.|.....|:.|...:|       |....:.||::
pombe   183 PIVMMP----------------LD----ITHQLHTSAKRIARMEALP-------NRVGPVVAAWL 220

  Fly   271 -FPKAMIAEQL--------DYHATVELAGVHTRGQMVLDHLRGRRVDAIHGKKSNVRIITHLNRE 326
             ..||..|::.        |.:..:.|.                |.|...|:|.||:|.|.....
pombe   221 RMEKAYEAKKYGTDGGPLHDPNTVMWLL----------------RPDIYSGRKVNVQIETQSELT 269

  Fly   327 PFRTIMSW--TGFLPG-------VDITELCE 348
            ...:::.|  .|.||.       ||..|..|
pombe   270 MGMSVVDWWQVGLLPANVTFLRTVDDDEFYE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5418NP_609571.1 nuc_hydro_CeIAG 10..332 CDD:239115 83/329 (25%)
urh1NP_595062.1 nuc_hydro_IU_UC_XIUA 2..306 CDD:239117 91/356 (26%)

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