DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp33Eb and Slco1b2

DIOPT Version :9

Sequence 1:NP_609570.1 Gene:Oatp33Eb / 34662 FlyBaseID:FBgn0032435 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_113838.1 Gene:Slco1b2 / 58978 RGDID:69300 Length:687 Species:Rattus norvegicus


Alignment Length:668 Identity:154/668 - (23%)
Similarity:267/668 - (39%) Gaps:152/668 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RTFILVLAISGTLQGACESYFRVSAKQASFQFGWNPLIVDWLLVASGLFQAVFALAFAYWADVYH 111
            |.|.:..:|||.:.|             .|:.| |.|::            ||.   :|:....|
  Rat    57 RRFDIPSSISGLIDG-------------GFEIG-NLLVI------------VFV---SYFGSKLH 92

  Fly   112 PIKWLVGTLMLQAVTCVVAVIPSIM----NFADG--NQAKDALLDANMCATSLAQFQRLTLTEAQ 170
            ..| |:|      :.|.:..|.||:    :|..|  ..||:..:.:...:|......::|.....
  Rat    93 RPK-LIG------IGCFIMGIGSILTALPHFFMGYYKYAKENDIGSLGNSTLTCFINQMTSPTGP 150

  Fly   171 SSSL----------TLAMLFVL--QLALGMGGLAYYTLGVSYIDDNSLSQDSP---------AVI 214
            |..:          :...::||  .:..|:|......||:||:||.:....:.         |:|
  Rat   151 SPEIVEKGCEKGLKSHMWIYVLMGNMLRGIGETPIVPLGISYLDDFAKEGHTSMHLGTLHTIAMI 215

  Fly   215 GAALAARVFGQQAGSFLVLG-VGLTHV-----------GWWLGWVI--------LAPFIFVGAVL 259
            |..|...:....|..::.:| |.|..|           .|||.:::        ..||.|:..: 
  Rat   216 GPILGFIMSSVFAKIYVDVGYVDLNSVRITPNDARWVGAWWLSFIVNGLLCITSSIPFFFLPKI- 279

  Fly   260 LGLFPKRLPK----TVIHQAAQRIIEQSSMRRFGSQFSTYMDDSD---FWPSLKRLFNNRL-LMF 316
                |||..:    :|...|.:...|:..|.....|  ...|.|:   |..||:.:..|.: ::|
  Rat   280 ----PKRSQEERKNSVSLHAPKTDEEKKHMTNLTKQ--EEQDPSNMTGFLRSLRSILTNEIYVIF 338

  Fly   317 NLLSIMCVQSAVVNYGLQEESYLQSRFFLPYNEQDGLAAEWRSAFVSYFLKPPVMALGMLISGLV 381
            .:|:::.|...:.::     :||    |....:|.|..|. ::.|:...:..|.||..|.:.|.:
  Rat   339 LILTLLQVSGFIGSF-----TYL----FKFIEQQFGRTAS-QANFLLGIITIPTMATAMFLGGYI 393

  Fly   382 ISKAKLSARKITGINIALSIHLVA----IFIGLIF-VQCDVGAIAGV----EG-----GKLKQP- 431
            :.|.||     |.:.||..:...:    .|..|.| :.|:....||:    :|     ..:..| 
  Rat   394 VKKFKL-----TSVGIAKFVFFTSSVAYAFQFLYFPLLCENKPFAGLTLTYDGMNPVDSHIDVPL 453

  Fly   432 -YCSSQCLCTPTAFMPVCPENSSVTYFSPCYAGC-----TKKTTINSFQLFEGCSCSGDQSLNST 490
             ||:|.|.|....:.|:|.|| .|||.|||.|||     .||.  |:.:.:: |||     ::::
  Rat   454 SYCNSDCSCDKNQWEPICGEN-GVTYISPCLAGCKSFRGDKKP--NNTEFYD-CSC-----ISNS 509

  Fly   491 GQMRATAGACSSDNCQSAIIIFQIMSISVAFLMGVGAIGKTLITLRAVLPQDKSLALAFELMIVG 555
            |...|..|.|....|::....:.|:.::|:|...:|:....||.:::|.|:.||||:.|..:|:.
  Rat   510 GNNSAHLGECPRYKCKTNYYFYIILQVTVSFFTAMGSPSLILILMKSVQPELKSLAMGFHSLIIR 574

  Fly   556 LFAYVPVHLSYDIVTRTTCVYWA----PNYERCLLRETPKHGNILDILTASLILAS---VLFDIL 613
            ....:...:.|......||:.|:    .....|.|..:...|  ...|..:|.|.:   .|:.:|
  Rat   575 ALGGILAPIYYGAFIDRTCIKWSVTSCGKRGACRLYNSRLFG--FSYLGLNLALKTPPLFLYVVL 637

  Fly   614 VYIFAKGLNLYNCKVTDN 631
            :|...:.....:.|..:|
  Rat   638 IYFTKRKYKRNDNKTLEN 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp33EbNP_609570.1 oat 23..619 CDD:273279 152/654 (23%)
MFS 50..>267 CDD:119392 53/263 (20%)
KAZAL_SLC21 430..483 CDD:238650 25/59 (42%)
Slco1b2NP_113838.1 MFS 28..555 CDD:421695 131/564 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..311 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.