DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp33Eb and slco1c1

DIOPT Version :10

Sequence 1:NP_609570.1 Gene:Oatp33Eb / 34662 FlyBaseID:FBgn0032435 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_031754287.1 Gene:slco1c1 / 100495559 XenbaseID:XB-GENE-6448025 Length:596 Species:Xenopus tropicalis


Alignment Length:487 Identity:114/487 - (23%)
Similarity:202/487 - (41%) Gaps:73/487 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 LFVL--QLALGMGGLAYYTLGVSYIDDNSLSQDSPAVIG----AALAARVFGQQAGS-----FLV 232
            ::||  .|..|:|......||:|||||.:...::...||    :|:...:||...||     |:.
 Frog    75 IYVLLGNLLRGIGEAPIQPLGISYIDDYASEDNTAFYIGCVQTSAVIGPIFGFLLGSLCAKLFVD 139

  Fly   233 LG-VGLTHV-----------GWWLGWVILAPFIFVGAVLLGLFPKRLPKTVIHQAAQRIIEQSSM 285
            :| |.|..|           .||||::|....|.:..:.....||..|:....:......|||  
 Frog   140 IGSVNLDSVTITPADAQWVGAWWLGYLIAGGIIVLATIPFWFLPKEQPRVETGKTPSTPSEQS-- 202

  Fly   286 RRF----GSQFSTYMDD-------SDFWPSLKRLFNNRLLMFNLLSIMCVQSAVVNYGLQEESYL 339
             ||    ..:.:|..|.       .||.||:|.||.|.:....|...:...::::.....:..|:
 Frog   203 -RFILEEQKEATTEQDGVHLLNMAKDFLPSVKDLFGNPVYFLYLCGSVFQYNSLIGMVTYKPKYI 266

  Fly   340 QSRFFLPYNEQDGLAAEWRSAFVSYFLKPPVMALGMLISGLVISKAKLSARKITGINIALSIHLV 404
            :        :|.|..:. ::.|:...:..|.:|||:...|:::.:.:::......:.:..|:...
 Frog   267 E--------QQYGQTSS-KTNFLIGLINIPAVALGIFSGGVIMKRFRINILGAAKLLLGPSLLGY 322

  Fly   405 AIFIGLIFVQCDVGAIAGVE---GGKLKQPY-------CSSQCLCTPTAFMPVCPENSSVTYFSP 459
            .:.:.|..:.|...::||:.   .|..:..|       |:..|.|..|.:.|||.|| .:||:|.
 Frog   323 LVLLSLFAMGCKNSSVAGLTVSYQGSAQISYQENEVSECNVGCKCPQTHWDPVCGEN-GLTYYSA 386

  Fly   460 CYAGCTKKTTINSFQLFEGCSCSGDQSLNSTGQMRATAGACS-SDNCQSAIIIFQIMSISVAFLM 523
            |:|||...........|..|||.|.......|...|.||.|: ..:|.:..:.|.:.|:..:|.:
 Frog   387 CFAGCRVSNGTGKRAEFYNCSCVGAPMSQPGGGGSAVAGPCARGTDCSNMFLYFVVTSVMTSFAL 451

  Fly   524 GVGAIGKTLITLRAVLPQDKSLALAFELMIVGLFAYVPVHLSYDIVTRTTCVYWAPN-------- 580
            .:|.....::.||.:.|:.||.||....:::.:.|.:|..:....:..|.|:.|:..        
 Frog   452 SLGGTPGYMLLLRCIKPELKSFALGIYTLVIRVLAGIPAPMYLGALIDTVCLRWSSRSCAGRGAC 516

  Fly   581 -------YERCLLRETPKHGNILDILTASLIL 605
                   :....|..|...|.:...:||:::|
 Frog   517 RFYNTDAFRYIYLGMTLALGTVFIFMTAAVVL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp33EbNP_609570.1 MFS_SLCO_OATP 46..536 CDD:340894 96/401 (24%)
PHA03247 <635..813 CDD:223021
slco1c1XP_031754287.1 MFS 1..465 CDD:475125 97/402 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.