DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oatp33Eb and slco4c1

DIOPT Version :9

Sequence 1:NP_609570.1 Gene:Oatp33Eb / 34662 FlyBaseID:FBgn0032435 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_002933490.4 Gene:slco4c1 / 100485817 XenbaseID:XB-GENE-983309 Length:783 Species:Xenopus tropicalis


Alignment Length:673 Identity:165/673 - (24%)
Similarity:272/673 - (40%) Gaps:146/673 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GW----------CRGPGCQKYARLRTFILVLAISGTLQG-ACESYFRVSAKQASFQFGWNPLIVD 86
            ||          |..|        :.::::.::...:|| |......|.......:|..|..:  
 Frog   158 GWGSFTPSCVQCCNNP--------KGYLVMYSLLAVMQGTAVNGLVNVVISTIEKRFDLNSSL-- 212

  Fly    87 WLLVASGLFQAVFALAF-------AYWADVYHPIKWLVGTLMLQAVTCVVAVIPSIMN--FADGN 142
                 :||..|.:.:||       :::....|..:||..:.::..:..:|..||:..:  :..||
 Frog   213 -----TGLIAASYDIAFCLLSLFVSFYGQRGHKPRWLAFSALMIGLGSLVFSIPNFFSGIYEYGN 272

  Fly   143 QAKDALLDANMCATSLAQFQRLTLTEAQSSSLTLAMLFVL-QLALGMGGLAYYTLGVSYIDDNSL 206
            :..|      .|..| .....|....|.||......:||| ||.:|:||...||||.:|.||:..
 Frog   273 KVSD------FCEVS-GNSSSLQNCSAGSSQSYFLYVFVLGQLLMGVGGTPLYTLGTAYFDDSLP 330

  Fly   207 SQDSPAVIGAALAARVFGQQAGSFLVLG--------------VGLTHV------GWWLG------ 245
            ...|...||.|....|.|...| :||.|              |.:|..      .||:|      
 Frog   331 PHKSSLYIGIAYGMSVVGPAIG-YLVGGQLLNIYIDIDKGQSVNITETDPRWLGAWWIGFLICGL 394

  Fly   246 --WVILAPFIFVGAVLLGLFPKRLPKTV------IHQA----AQRIIEQSSMRRFGSQFSTYMDD 298
              |:::|||        ..|||.||.|.      |.||    ::.|:|..::   |..|      
 Frog   395 VTWLLIAPF--------SCFPKHLPGTEKMQSERISQAHNNGSESIVESKNL---GKSF------ 442

  Fly   299 SDFWPSLKRLFNNRLLMFNLLSIMCVQSAVVNYGLQEESYLQSRF--FLP--YNEQDGLAAEWRS 359
            .||..:|..|..|.:|: :|....|.           ::::.:.|  |||  ...|..|.:.: |
 Frog   443 KDFPLALLLLVKNPVLI-SLTFASCF-----------DAFITTAFAAFLPKFIENQFSLTSSF-S 494

  Fly   360 AFVSYFLKPPVMALGMLISGLVISKAKLSARKITGINIALSIHLVAIFIGLIFVQCDVGAIAGV- 423
            |.:...:..|..|:|.::.|:::||.|...:.|...:|.:::..:|:....||.:|.....||| 
 Frog   495 AILGGGVLIPAAAIGQVLGGVIVSKCKFDCKNIIKFSIIITVISLALASVFIFARCGNDPFAGVS 559

  Fly   424 -------EGGKLKQPYCSSQCLCTPTAFMPVCPENSSVTYFSPCYAGCTKKTTINSFQLFEGCSC 481
                   :.|:|..| |:|.|.|....:.||| .:..|.|||.||||||.....:..:::..|||
 Frog   560 VQYNGTGKIGELDAP-CNSNCSCARFFYDPVC-GSDGVQYFSSCYAGCTSVEYNDKGKIYGNCSC 622

  Fly   482 ----SGDQSLNSTGQMRATAGACSSDNCQSAIIIFQIMSISVAFLMGVGAIGKTLITLRAVLPQD 542
                :|:..:|.|.|  |..|.|.: .|.: :|.|.:....|.....:.|...|:..||.|..:.
 Frog   623 IASHTGEFGVNVTSQ--AEQGKCEA-KCNN-LITFMVFFFFVVVATFMTATPITMAILRCVPDKQ 683

  Fly   543 KSLALAFELMIVGLFAYVPVHLSYDIVTRTTCVYWAPNYERC-------LLRETPKHGNILDILT 600
            :|.||..:..::.|...:|..:.:.:|..::|:.|  |...|       ..:.:....|::.|..
 Frog   684 RSFALGVQWSLIRLLGSIPGPIVFGVVIDSSCILW--NINECGVEGACWTYKNSEMSLNLVFISA 746

  Fly   601 ASLILASVLFDILVYIF---AKG 620
            |..:|......|...::   :||
 Frog   747 ACKVLTIAFLSIAFCVYKPPSKG 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp33EbNP_609570.1 oat 23..619 CDD:273279 163/670 (24%)
MFS 50..>267 CDD:119392 63/255 (25%)
KAZAL_SLC21 430..483 CDD:238650 21/56 (38%)
slco4c1XP_002933490.4 MFS_SLCO4C_OATP4C 173..677 CDD:341021 142/562 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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