DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5421 and Atp6ap1l

DIOPT Version :9

Sequence 1:NP_001260418.1 Gene:CG5421 / 34661 FlyBaseID:FBgn0032434 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_038958437.1 Gene:Atp6ap1l / 361875 RGDID:1564936 Length:360 Species:Rattus norvegicus


Alignment Length:124 Identity:24/124 - (19%)
Similarity:46/124 - (37%) Gaps:32/124 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 SQGNWY---LTRMIFMNNTH--------YPRDLYFYGFE--FSLCCTDITVYSSEAS------RL 344
            |..:|:   ...:||.|:..        |....|.|..:  .||...|..:..|.:.      .:
  Rat   190 SSQSWFSLHRVEIIFNNSVQATFNATGIYALSTYSYHCQRVSSLRRNDALLLLSSSDDVTSLWEV 254

  Fly   345 SFFDFHLDILWQDKDNGLDLQ-YEVKPCWNCSILMTPT----MAQTIFVVLIIAAILWM 398
            :|.||.:        .|..:: .:.....:||...:|.    :|.::.::|::|..|.|
  Rat   255 TFIDFQI--------QGFSIKGAQFSQARDCSSSFSPAVLIGLAMSLILLLVLAYALHM 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5421NP_001260418.1 None
Atp6ap1lXP_038958437.1 ATP-synt_S1 177..317 CDD:399083 24/124 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3868
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002234
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12471
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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