DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5421 and atp6ap1b

DIOPT Version :9

Sequence 1:NP_001260418.1 Gene:CG5421 / 34661 FlyBaseID:FBgn0032434 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_775372.2 Gene:atp6ap1b / 195824 ZFINID:ZDB-GENE-020423-2 Length:459 Species:Danio rerio


Alignment Length:507 Identity:97/507 - (19%)
Similarity:164/507 - (32%) Gaps:176/507 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYFIASLLLIVPIAFGSAPVTSSPPVLVWGVDTPKATSIFQ-----PVTTAQFRKIIRNLQKN-- 58
            |.|.:.||.|..|....|.|    |:|:|..|......:.:     .|:..|....:|:....  
Zfish    14 MAFTSVLLFICSIYSCYAQV----PLLMWTSDGSSMPHLAEAAAGHTVSGGQLVSYLRSALSTAP 74

  Fly    59 NMIVIYLASELAAKDINC---------DLCFPYLTKIQPMNYYSQVEEP-----LNAVERVAEKT 109
            :.::|:|..:|:.:|...         |..|        :|..|.::..     |:|::..|..:
Zfish    75 HNVLIFLQDQLSIEDFTMYGGVFGNKQDSAF--------LNIESALQTSSSPLVLSALDWTASHS 131

  Fly   110 G-DIIW--------HIP--KISEMGSLEAEMELPCQKGEIHAFSFNDRNLLAHDAAM--AVATYQ 161
            . |:..        ||.  .::||.....:..|...:....|.|.:...||.:|..:  .:..::
Zfish   132 VLDLFQKELSVSAVHIDTNTLNEMKLNNTQPSLLAVRLLYTAGSQSKEMLLKNDMIIGEVLDMFK 196

  Fly   162 FSDCPVVHVYTAYTE----ED-----------KALQRRKSQKTQHMSIKNKIDGQPSN---SDT- 207
            ..|.|...|||....    ||           ..||....|..:...:.|...|||..   :|| 
Zfish   197 SQDMPYTAVYTGLKPSRIIEDTPVMAGFSMGRSLLQTPPPQSEKPPLVFNDTAGQPCIMLWADTL 261

  Fly   208 -------EVELQPHQISQSQAD------NMTVLRNEMIVLTFRSILLATKEQRSVLSPFNRTEVM 259
                   :.:|..: |..|..|      |.||.|   :||.:|:||    ..:|:...|:.:::.
Zfish   262 LAAYDGNQADLASN-IFNSTPDTTGSFCNETVSR---LVLNYRNIL----NLQSLQLIFSMSKIF 318

  Fly   260 L---AQGREPLQVGLLNSHDIFGGIVMVLNTELG-------------------PLIVELIPSQGN 302
            .   |:....:...:|.    :.|...:.|...|                   ||:|        
Zfish   319 FPVSARNWTVMDQVVLE----YDGQRAMFNASAGINTPAEYSFRCQNVSSAQSPLLV-------- 371

  Fly   303 WYLTRMIFMNNTHYPRDLYFYGFEFSLCCTDITVYSSEASRLSFFDFHLDILWQDKDNGLDLQYE 367
                          ||:......:::|..||..:.|...:..| |.|..|               
Zfish   372 --------------PRNATDNATKWTLIFTDFQIQSFSVTGDS-FAFASD--------------- 406

  Fly   368 VKPCWNCSILMTPTMAQTIFVVLIIAAILWMGLAI------LLSIGQNQLMQ 413
                  |:              ...:|.:||||.|      :|:.|.:.:||
Zfish   407 ------CA--------------GFFSAGIWMGLVISLLMLLILTYGLHMIMQ 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5421NP_001260418.1 None
atp6ap1bNP_775372.2 ATP-synt_S1 310..456 CDD:310428 30/191 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3868
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002234
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12471
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.000

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