DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5421 and LOC100487454

DIOPT Version :9

Sequence 1:NP_001260418.1 Gene:CG5421 / 34661 FlyBaseID:FBgn0032434 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_004913049.1 Gene:LOC100487454 / 100487454 -ID:- Length:454 Species:Xenopus tropicalis


Alignment Length:507 Identity:94/507 - (18%)
Similarity:157/507 - (30%) Gaps:180/507 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLIVPIAFGSAPV-TSSPPVLVWGVDTP----KATSIFQPVTTA-QFRKII--RNLQKNNMIVI 63
            |||.:..||.||.: .|..|||:|..:..    |.|.....:|:. :|.|::  ........|::
 Frog     7 LLLCLCFAFISAVMPMSHVPVLIWSTERSFLKVKPTVHGGHITSEHEFHKLLDPEFTATPKTIIL 71

  Fly    64 YLASELAAKDINCDLCFPYLTKIQPMNYYS----------QVEEPLNA------VERVAEKTGDI 112
            :|...|:.:|               ..|||          .|:..:|:      :..|..||   
 Frog    72 FLQETLSMED---------------FTYYSSLSGSEGTMHNVKVLMNSSPSSLVIPAVNWKT--- 118

  Fly   113 IWHIP-KISEMGS---LEAEMELPCQKGEIHAFSFNDRNL-------LAHDAAMAVATYQFSDCP 166
            |.|:| .|...|.   :.|:..|.....|:..   ...||       |...:.:|.|        
 Frog   119 IHHLPGYIKNRGKWNIIRADQNLSISSVELKT---EKSNLIIVKLQPLPRSSNIAAA-------- 172

  Fly   167 VVHVYTAYTEEDKALQR-------------------RKSQKTQHMSIKNKIDGQPSNSDTEVELQ 212
                 .|::|.||.:.|                   :.|:..|...:..||..|..:..|.....
 Frog   173 -----KAFSENDKLIGRLTKELIKRDIDFTGIYTGMKPSKVLQTFEMTAKIGRQLQSIGTTAPYP 232

  Fly   213 PHQISQS-------QADNMTVLRNEMIVLTFRSILLATKEQRSVLSPFNRTEVMLA-------QG 263
            |..::..       .|..:.:..|...|....::....|...:.||..:::...|:       .|
 Frog   233 PLNVTNGTATCILIYATQILITANNSQVFDLTNVTFEAKTANTSLSTCSQSNTTLSLLYSSPGNG 297

  Fly   264 REPLQVGLLNSHDIFGGIVMVLNTELGPLIVELIPSQGNWYL------------TRMIFMNNTHY 316
            ...|::..:.::..:.|                  |..||::            :|:...|..  
 Frog   298 LRSLEIRFVMTNQFYTG------------------SARNWFMLESIEIIPDGDESRIATFNTA-- 342

  Fly   317 PRDLYFYG---FEFSLCCTDITVYS----------SEASRLSFFDFHLDILWQDKDNGLDLQYEV 368
                  ||   .|:|..|..|...|          |:|...:.|.....|      .|.::|..:
 Frog   343 ------YGSAPAEYSYHCQQIGTSSAYGEQLVRSNSQAGSWNIFISEFQI------QGFNIQNNL 395

  Fly   369 -KPCWNCSILMTPTMAQTIFVVLIIAAILWMGLAI------LLSIGQNQLMQ 413
             ....:|:...||.              :||||..      :||.|...:||
 Frog   396 FSYASDCTSFFTPA--------------IWMGLVSSIVLLWILSYGIFMIMQ 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5421NP_001260418.1 None
LOC100487454XP_004913049.1 ATP-synt_S1 301..452 CDD:368630 32/179 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002234
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.