DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment eRF3 and AT1G07930

DIOPT Version :9

Sequence 1:	NP_001260415.1	Gene:	eRF3 / 34658	FlyBaseID:	FBgn0020443	Length:	619	Species:	Drosophila melanogaster
Sequence 2:	NP_563800.1	Gene:	AT1G07930 / 837308	AraportID:	AT1G07930	Length:	449	Species:	Arabidopsis thaliana

Alignment Length:	428	Identity:	154/428 - (35%)
Similarity:	253/428 - (59%)	Gaps:	7/428 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly   195 HVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKGK 259
            |:|:|.|||||:||||..|.::...|.:|||.:|::|:||.|.::.|:..:|.||..:.||::|.
plant     7 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGI 71

  Fly   260 TVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQTREH 324
            |:::....|||.:.:.|::|||||:.|:.|||.|.:|||.|||:|.:..|.||.|..:.||||||
plant    72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136

  Fly   325 AMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLSGYG 389
            |:||.|.|||.::...||||..|..:.:.||:|...::..||||:|:||.| :.|:|.||..|..
plant   137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDK-IPFVPISGFEGDN 200

  Fly   390 LKDQIPETLCPWYRGPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMGTVVMGKVESGTARKG 452
            :.::  .|...||:||..:..:|::....|.||.|..:|:.|.||  .:|||.:|:||:|..:.|
plant   201 MIER--STNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPG 263

  Fly   453 QNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFVLCDAA-NPIKTGKIF 516
            ..:...|......|..:......:....||:||...:|.:..:|:..|:|..::. :|.|....|
plant   264 MVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANF 328

  Fly   517 DAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLVDKKSGDKSKTRPRFVKQDQVAIMRIE 581
            .:||:|:.|...|..||:.|:..|.:...|....::..:|::||.:.:..|:|:|.....::::.
plant   329 TSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMT 393

  Fly   582 CSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            .:..:.:|.|..:|.:|||.:||..:|:|:| |:|.|:
plant   394 PTKPMVVETFSEYPPLGRFAVRDMRQTVAVG-VIKSVD 430

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
eRF3	NP_001260415.1	PAM2	12..28	CDD:284542
		TEF1	191..619	CDD:227581	153/426 (36%)
		EF1_alpha	197..416	CDD:206670	94/218 (43%)
		eRF3_II	424..505	CDD:293906	23/82 (28%)
		eRF3_C_III	511..617	CDD:294003	30/105 (29%)
AT1G07930	NP_563800.1	PTZ00141	1..446	CDD:185474	154/428 (36%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5256
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1150082at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X149
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.820