DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and AT1G07930

DIOPT Version :10

Sequence 1:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_563800.1 Gene:AT1G07930 / 837308 AraportID:AT1G07930 Length:449 Species:Arabidopsis thaliana


Alignment Length:428 Identity:154/428 - (35%)
Similarity:253/428 - (59%) Gaps:7/428 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 HVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKGK 259
            |:|:|.|||||:||||..|.::...|.:|||.:|::|:||.|.::.|:..:|.||..:.||::|.
plant     7 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGI 71

  Fly   260 TVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQTREH 324
            |:::....|||.:.:.|::|||||:.|:.|||.|.:|||.|||:|.:..|.||.|..:.||||||
plant    72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136

  Fly   325 AMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLSGYG 389
            |:||.|.|||.::...||||..|..:.:.||:|...::..||||:|:||.| :.|:|.||..|..
plant   137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDK-IPFVPISGFEGDN 200

  Fly   390 LKDQIPETLCPWYRGPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMGTVVMGKVESGTARKG 452
            :.::  .|...||:||..:..:|::....|.||.|..:|:.|.||  .:|||.:|:||:|..:.|
plant   201 MIER--STNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPG 263

  Fly   453 QNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFVLCDAA-NPIKTGKIF 516
            ..:...|......|..:......:....||:||...:|.:..:|:..|:|..::. :|.|....|
plant   264 MVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANF 328

  Fly   517 DAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLVDKKSGDKSKTRPRFVKQDQVAIMRIE 581
            .:||:|:.|...|..||:.|:..|.:...|....::..:|::||.:.:..|:|:|.....::::.
plant   329 TSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMT 393

  Fly   582 CSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            .:..:.:|.|..:|.:|||.:||..:|:|:| |:|.|:
plant   394 PTKPMVVETFSEYPPLGRFAVRDMRQTVAVG-VIKSVD 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 94/218 (43%)
eRF3_II 424..505 CDD:293906 23/82 (28%)
eRF3_C_III 511..617 CDD:294003 30/105 (29%)
AT1G07930NP_563800.1 PTZ00141 1..446 CDD:185474 154/428 (36%)
Blue background indicates that the domain is not in the aligned region.

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