DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and AT5G10630

DIOPT Version :9

Sequence 1:NP_001260415.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001331942.1 Gene:AT5G10630 / 830928 AraportID:AT5G10630 Length:743 Species:Arabidopsis thaliana


Alignment Length:581 Identity:181/581 - (31%)
Similarity:295/581 - (50%) Gaps:36/581 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 ATTPDSVGSGGSTAGAAPP-------------------PPTAQGAGAAAPSAQPPTSSSNSASPA 110
            |.:||.:.|.|.|:....|                   .|..:|..::..|::......:....|
plant   171 APSPDDLVSNGLTSSKTGPKGSGDASMRQKEKQDSVEQKPLKKGGDSSETSSRGRHDKLDDKGGA 235

  Fly   111 PG--SPATTPSAGAAAADPTPIDGLNPSDKIANNETDPADSWDVDDAVITPEDEEVEDAEFTEGE 173
            .|  |..:.|.|.|..::.|     :.|.|..  ||..:.:..::...:..|.|...|.:....:
plant   236 GGIKSGKSLPKAKADMSNET-----SSSSKYM--ETSESLTGTMNKMSLIGETENSSDIKIRGPK 293

  Fly   174 ATPKVSKKKVVKVEENRSKREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKS 238
            :..|...::.:.:::.......:|:..:||||:||||:.|:::.|.|.:.::.:.|||:||:.:.
plant   294 SQSKHKPEEWMLLDKESDALSQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQG 358

  Fly   239 RESWYLSWALDTNQEERDKGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLV 303
            :.|:..:||||.:.|||::|.|:.|..|:|.:.|.|..:||:||||.||||||.||.|||.|:||
plant   359 KGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILV 423

  Fly   304 ISARKGEFETGFDR-GGQTREHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLK 367
            |.|..|.||.|||. .|||||||.:.:..||:.::|.:||||  .|.:.:.|::..|..:..:|:
plant   424 IDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMD--IVGYSKERFDLIKQHVGSFLQ 486

  Fly   368 KLGFNPAKDLTFMPCSGLSGYGLKDQIPET-LCPWYRGPAFIPFIDELPSLNRKSDGPFIMPIVD 431
            ...|..: .||::|.|.:....|.....:. |..||:||..:..:|.:.|.:|....|.:|||.|
plant   487 SCRFKDS-SLTWIPLSAMENQNLVAAPSDNRLSSWYQGPCLLDAVDSVKSPDRDVSKPLLMPICD 550

  Fly   432 KYK--DMGTV-VMGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIE 493
            ..:  ..|.| ..||:|:|..|.|..::|||:..|..:..|..|....|....|:||.:.|:||:
plant   551 AVRSTSQGQVSACGKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQACTIARAGDNVALALQGID 615

  Fly   494 EEDVSPGFVLCDAANPIKTGKIFDAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLVDKK 558
            ...|..|.|||....|:......:..|::||..:.|..|.....|:|.|.|..||..|:.::|.|
plant   616 ANQVMAGDVLCHPDFPVSVATHLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPK 680

  Fly   559 SGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            :|..:|..||.:...|.|::.:.....:|:|.|.....:||..||...:|:|:|||.::::
plant   681 TGQPTKKSPRCLTAKQSAMLEVSLQNPVCVETFSESRALGRVFLRSSGRTVAMGKVTRIIQ 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_001260415.1 PAM2 12..28 CDD:284542
TEF1 191..619 CDD:227581 156/432 (36%)
EF1_alpha 197..416 CDD:206670 90/220 (41%)
eRF3_II 424..505 CDD:293906 30/83 (36%)
eRF3_C_III 511..617 CDD:294003 32/105 (30%)
AT5G10630NP_001331942.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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