DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and eef2a.1

DIOPT Version :10

Sequence 1:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001038626.3 Gene:eef2a.1 / 792182 ZFINID:ZDB-GENE-050522-500 Length:854 Species:Danio rerio


Alignment Length:391 Identity:86/391 - (21%)
Similarity:145/391 - (37%) Gaps:122/391 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VVKVEENRSKREHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSW 246
            |.::.....|:.:: |:..||..|.||||:...::|..|:|           :..::.|:.:   
Zfish     6 VDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSKAGIV-----------SSARAGETRF--- 56

  Fly   247 ALDTNQEERD-----KGKTVEVGRAFFETDRKH--------------FTILDAPGHKSFVPNMIG 292
             :||.::|::     |..|:.:   |:|...|.              ..::|:|||..|...:..
Zfish    57 -MDTRRDEQERCITIKSTTISI---FYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTA 117

  Fly   293 GAAQADLAVLVISARKG---EFETGFDRGGQTREHAMLAKTAGVK-HLVVLVNKMDD-------- 345
            .....|.|:||:....|   :.||            :|.:..|.: ..|:::||||.        
Zfish   118 ALRITDGALLVVDCVSGVCLQTET------------VLRQAIGERIKPVLMINKMDRALLELQLV 170

  Fly   346 ------------PTVNWDQTRYNECKD------KILPYLKKLGFNPAKDLTFMPCSGLSGYG--L 390
                        ..||...:.|.|.:.      .|.|.:..|.|.          |||.|:.  |
Zfish   171 PEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFG----------SGLHGWAFTL 225

  Fly   391 KDQIPETLCPWYRGPAFI---PFIDELPSLNRKSDGPFIMPIVDKYKDMGTVVMGKV-ESGTARK 451
            | |..|.....:.|.|.:   .:|.::..:.::..|       |.|.|..|   ||. ||.|:..
Zfish   226 K-QFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWG-------DSYFDSTT---GKFSESATSPD 279

  Fly   452 GQNLLVMPNRT--QVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFVLCDAANPIKTGK 514
            |:.|    .||  .:.:|.:|.....:.:....|.||:    ||:..:.     .|..:..|.||
Zfish   280 GKKL----PRTFVHLVLDPIFKVFDAIMNFKKEETVKL----IEKMGIK-----LDVEDKEKEGK 331

  Fly   515 I 515
            |
Zfish   332 I 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 58/272 (21%)
eRF3_II 424..505 CDD:293906 20/83 (24%)
eRF3_C_III 511..617 CDD:294003 4/5 (80%)
eef2a.1NP_001038626.3 None
Blue background indicates that the domain is not in the aligned region.

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