DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eRF3 and si:dkey-37o8.1

DIOPT Version :9

Sequence 1:NP_001260415.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001157466.1 Gene:si:dkey-37o8.1 / 407641 ZFINID:ZDB-GENE-030131-5667 Length:458 Species:Danio rerio


Alignment Length:448 Identity:162/448 - (36%)
Similarity:250/448 - (55%) Gaps:29/448 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 KREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERD 256
            :|.|:|:|.|||||.||||..|.::...|.:|.||:||||:.|.:..:.|:..:|.||..:.||:
Zfish     4 ERIHINLVIIGHVDGGKSTTTGHLVYKCGGIDHRTIEKYEKAATQMGKSSFKYAWVLDKLKAERE 68

  Fly   257 KGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQT 321
            :|.|:::....|.|.:..|||:|||||:.|:.|||.|.:|||.|:|::||.|||||.|..|.|||
Zfish    69 RGITIDISLLKFNTQKYTFTIIDAPGHRDFIKNMITGTSQADAALLIVSAAKGEFEAGISRNGQT 133

  Fly   322 REHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLS 386
            ||||:||.|.|||.|||.|||||.....:.|.||:|....:..::||:||.... :.|:|.||.|
Zfish   134 REHALLAYTLGVKQLVVCVNKMDLTEPPFSQKRYDEVVRNVSVFVKKIGFEIGA-VPFIPISGWS 197

  Fly   387 GYGLKDQIPETLCPWYR------------GPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMG 437
            |..:  .:|.....|::            |...:..:|.|....|.:..|..:|:.|.||  .:|
Zfish   198 GENM--IVPSQKMQWFKGWKLKRKEGHCHGRTLLEVLDSLHPPVRNAGKPLRLPLQDVYKIGGVG 260

  Fly   438 TVVMGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFV 502
            ||.:||:|:|..:.|..|...|.:....|..:......:.:..||.||...:|.:..:::..|.|
Zfish   261 TVPVGKIETGVLKPGMVLTFSPAKLTAEVKSIEMHHQGLQTALPGHNVGFNIKNVSVKNLRRGDV 325

  Fly   503 LCDA-ANPIKTGKIFDAQVVILEHKSIICAGYSAVM-----HIHCAAEEVTVKALICLVDKKSGD 561
            ..:| .:|......|.||:::|.|...|..|||.|:     |:.|...|:..|     :|::||.
Zfish   326 AGNAQQDPPSDVSSFIAQIIMLNHPGKIKVGYSPVLDCHTTHVSCRFAELREK-----LDRRSGR 385

  Fly   562 KSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            |.::.|::::....|.:::..:..:|:|.|..:|.:|||.:||..:|:|:| |:|.||
Zfish   386 KLESWPQYLRSGDGATVKLVPNKPLCVESFFHYPPLGRFAVRDLKQTVAVG-VIKSVE 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_001260415.1 PAM2 12..28 CDD:284542
TEF1 191..619 CDD:227581 160/446 (36%)
EF1_alpha 197..416 CDD:206670 98/230 (43%)
eRF3_II 424..505 CDD:293906 23/82 (28%)
eRF3_C_III 511..617 CDD:294003 33/110 (30%)
si:dkey-37o8.1NP_001157466.1 PTZ00141 1..458 CDD:185474 162/448 (36%)
EF1_alpha 9..239 CDD:206670 98/232 (42%)
EF1_alpha_II 244..332 CDD:293894 24/87 (28%)
EF1_alpha_III 337..438 CDD:294004 32/106 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592503
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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