DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and eef1a1l3

DIOPT Version :10

Sequence 1:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001157466.1 Gene:eef1a1l3 / 407641 ZFINID:ZDB-GENE-030131-5667 Length:458 Species:Danio rerio


Alignment Length:448 Identity:162/448 - (36%)
Similarity:250/448 - (55%) Gaps:29/448 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 KREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERD 256
            :|.|:|:|.|||||.||||..|.::...|.:|.||:||||:.|.:..:.|:..:|.||..:.||:
Zfish     4 ERIHINLVIIGHVDGGKSTTTGHLVYKCGGIDHRTIEKYEKAATQMGKSSFKYAWVLDKLKAERE 68

  Fly   257 KGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQT 321
            :|.|:::....|.|.:..|||:|||||:.|:.|||.|.:|||.|:|::||.|||||.|..|.|||
Zfish    69 RGITIDISLLKFNTQKYTFTIIDAPGHRDFIKNMITGTSQADAALLIVSAAKGEFEAGISRNGQT 133

  Fly   322 REHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLS 386
            ||||:||.|.|||.|||.|||||.....:.|.||:|....:..::||:||.... :.|:|.||.|
Zfish   134 REHALLAYTLGVKQLVVCVNKMDLTEPPFSQKRYDEVVRNVSVFVKKIGFEIGA-VPFIPISGWS 197

  Fly   387 GYGLKDQIPETLCPWYR------------GPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMG 437
            |..:  .:|.....|::            |...:..:|.|....|.:..|..:|:.|.||  .:|
Zfish   198 GENM--IVPSQKMQWFKGWKLKRKEGHCHGRTLLEVLDSLHPPVRNAGKPLRLPLQDVYKIGGVG 260

  Fly   438 TVVMGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFV 502
            ||.:||:|:|..:.|..|...|.:....|..:......:.:..||.||...:|.:..:::..|.|
Zfish   261 TVPVGKIETGVLKPGMVLTFSPAKLTAEVKSIEMHHQGLQTALPGHNVGFNIKNVSVKNLRRGDV 325

  Fly   503 LCDA-ANPIKTGKIFDAQVVILEHKSIICAGYSAVM-----HIHCAAEEVTVKALICLVDKKSGD 561
            ..:| .:|......|.||:::|.|...|..|||.|:     |:.|...|:..|     :|::||.
Zfish   326 AGNAQQDPPSDVSSFIAQIIMLNHPGKIKVGYSPVLDCHTTHVSCRFAELREK-----LDRRSGR 385

  Fly   562 KSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            |.::.|::::....|.:::..:..:|:|.|..:|.:|||.:||..:|:|:| |:|.||
Zfish   386 KLESWPQYLRSGDGATVKLVPNKPLCVESFFHYPPLGRFAVRDLKQTVAVG-VIKSVE 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 98/230 (43%)
eRF3_II 424..505 CDD:293906 23/82 (28%)
eRF3_C_III 511..617 CDD:294003 33/110 (30%)
eef1a1l3NP_001157466.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..458 CDD:476819 162/448 (36%)
Blue background indicates that the domain is not in the aligned region.

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