DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and eef1a1o

DIOPT Version :9

Sequence 1:NP_001260415.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_989301.1 Gene:eef1a1o / 394920 XenbaseID:XB-GENE-1218983 Length:461 Species:Xenopus tropicalis


Alignment Length:446 Identity:168/446 - (37%)
Similarity:258/446 - (57%) Gaps:31/446 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 HVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKGK 259
            |:|:|.|||||:||||..|.::...|.:||||:||:|:||.|..:.|:..:|.||..:.||::|.
 Frog     7 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGI 71

  Fly   260 TVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQTREH 324
            |:::....|||.:.:.||:|||||:.|:.|||.|.:|||.|||:::...||||.|..:.||||||
 Frog    72 TIDISLWKFETGKFYITIIDAPGHRDFIKNMITGTSQADCAVLIVAGGVGEFEAGISKNGQTREH 136

  Fly   325 AMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLSGYG 389
            |:||.|.|||.|::.|||||.....:.|.|:.|...::..|:||:|:||| .:.|:|.||..|..
 Frog   137 ALLAFTLGVKQLIIGVNKMDSTEPPFSQKRFEEITKEVSAYIKKIGYNPA-TVPFVPISGWHGDN 200

  Fly   390 LKDQIPETLCPWYRG---------PAFIPFIDELPSL---NRKSDGPFIMPIVDKYK--DMGTVV 440
            :.:  ..|..||::|         .:.:..::.|..:   .|.:|.|..:|:.|.||  .:|||.
 Frog   201 MLE--ASTNMPWFKGWKIERKEGNASGVTLLEALDCIIPPQRPTDKPLRLPLQDVYKIGGIGTVP 263

  Fly   441 MGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFVLCD 505
            :|:||:|..:.|..:...|:.....|..:......:....||:||...:|.|..:|:..|.|..|
 Frog   264 VGRVETGVLKPGMVVTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGD 328

  Fly   506 AAN--PIKTGKIFDAQVVILEHKSIICAGYSAVM-----HIHCAAEEVTVKALICLVDKKSGDKS 563
            :.|  |::.| .|.|||:||.|...|.|||:.|:     ||.|...|:..|     :|::||.|.
 Frog   329 SKNDPPMQAG-TFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQK-----IDRRSGKKL 387

  Fly   564 KTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            :..|:|:|....||:.:.....:|:|.|..:|.:|||.:||..:|:|:| |:|.|:
 Frog   388 EDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVG-VIKGVD 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_001260415.1 PAM2 12..28 CDD:284542
TEF1 191..619 CDD:227581 167/444 (38%)
EF1_alpha 197..416 CDD:206670 96/227 (42%)
eRF3_II 424..505 CDD:293906 24/82 (29%)
eRF3_C_III 511..617 CDD:294003 40/110 (36%)
eef1a1oNP_989301.1 PTZ00141 1..461 CDD:185474 168/446 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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