DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and eEF1alpha1

DIOPT Version :9

Sequence 1:NP_001260415.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster


Alignment Length:444 Identity:171/444 - (38%)
Similarity:259/444 - (58%) Gaps:29/444 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 HVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKGK 259
            |:|:|.|||||:||||..|.::...|.:||||:||:|:||:|..:.|:..:|.||..:.||::|.
  Fly     7 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 71

  Fly   260 TVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQTREH 324
            |:::....|||.:.:.||:|||||:.|:.|||.|.:|||.|||:::|..||||.|..:.||||||
  Fly    72 TIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 136

  Fly   325 AMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLSGYG 389
            |:||.|.|||.|:|.|||||.....:.:.||.|.|.::..|:||:|:|||. :.|:|.||..|..
  Fly   137 ALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDN 200

  Fly   390 LKDQIPETLCPWYR------------GPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMGTVV 440
            :.:  |.|..||::            |...|..:|.:....|.:|....:|:.|.||  .:|||.
  Fly   201 MLE--PSTNMPWFKGWKVERKEGNADGKTLIDALDAILPPARPTDKALRLPLQDVYKIGGIGTVP 263

  Fly   441 MGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFVLCD 505
            :|:||:|..:.|..::..|......|..:......:....||:||...:|.:..:::..|:|..|
  Fly   264 VGRVETGVLKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGD 328

  Fly   506 A-ANPIKTGKIFDAQVVILEHKSIICAGYSAVM-----HIHCAAEEVTVKALICLVDKKSGDKSK 564
            : |||.|....|.|||::|.|...|..||:.|:     ||.|...|:..|     ||::||..::
  Fly   329 SKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEK-----VDRRSGKTTE 388

  Fly   565 TRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVV 618
            ..|:|:|....||:.:..|..:|:|.|:.||.:|||.:||..:|:|:| |:|.|
  Fly   389 ENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVG-VIKAV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_001260415.1 PAM2 12..28 CDD:284542
TEF1 191..619 CDD:227581 171/444 (39%)
EF1_alpha 197..416 CDD:206670 101/230 (44%)
eRF3_II 424..505 CDD:293906 21/82 (26%)
eRF3_C_III 511..617 CDD:294003 40/110 (36%)
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 171/444 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464635
Domainoid 1 1.000 131 1.000 Domainoid score I241
eggNOG 1 0.900 - - E1_COG5256
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I210
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm51361
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
98.900

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