DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and mEFG1

DIOPT Version :10

Sequence 1:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster


Alignment Length:531 Identity:96/531 - (18%)
Similarity:158/531 - (29%) Gaps:233/531 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 KVEENRSKREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALD 249
            |..|::......|:....|:|:||:|:..:|:..||    |..|.:|...::.      :...:|
  Fly    32 KFSEHKPIERIRNIGISAHIDSGKTTLTERILFYTG----RIAEMHEVRGKDN------VGATMD 86

  Fly   250 TNQEERDKGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETG 314
            :.:.||.:|.|::....:......:..|:|.|||..|...:.......|.||||:.|        
  Fly    87 SMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCA-------- 143

  Fly   315 FDRGGQTREHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTF 379
                           ..||:...:        |||....|||......:..|.:||.||.:.|:.
  Fly   144 ---------------VGGVQSQTL--------TVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQ 185

  Fly   380 M-------------------PCSGL--------------SGYGLK-DQIP--------------- 395
            |                   .|.|:              .|..:: |:||               
  Fly   186 MRSKMNHNAAFIQLPIGVESNCKGIVDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLERRQELI 250

  Fly   396 -------ETLCPWYRGPAFI---PFIDE---------------LP-----SLNRKSDGPFIMPIV 430
                   |||     |..|:   ||.::               .|     :|..|...|.:..::
  Fly   251 EHLSNADETL-----GELFLEEKPFTEDDIKAALRRTCINRTFTPVLVGTALKNKGVQPLLDAVL 310

  Fly   431 DKYKDMGTVV-MGKVE------------------------------------------SGTARKG 452
            |...:.|.|. :|.:|                                          .|..|||
  Fly   311 DYLPNPGEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYLRCYQGVLRKG 375

  Fly   453 QNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFVLCDAANPIKTGKIFD 517
            .|:.......:|.:.:|                 ::|...:.|||          |.:..|.|| 
  Fly   376 DNIFNARTNKKVRIARL-----------------VRLHSNQMEDV----------NEVYAGDIF- 412

  Fly   518 AQVVILEHKSIICAGYSAVMHIHCAA--------------EEVTV-KALICLVDKKSGDK----- 562
                             |:..:.||:              |.:.| :.::.:..|.:..|     
  Fly   413 -----------------ALFGVDCASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNF 460

  Fly   563 SKTRPRFVKQD 573
            ||...||.|:|
  Fly   461 SKAIARFTKED 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 58/297 (20%)
eRF3_II 424..505 CDD:293906 17/123 (14%)
eRF3_C_III 511..617 CDD:294003 16/83 (19%)
mEFG1NP_609105.1 FusA 38..731 CDD:440248 94/525 (18%)
Blue background indicates that the domain is not in the aligned region.

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