DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and gspt1l

DIOPT Version :9

Sequence 1:NP_001260415.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_942101.1 Gene:gspt1l / 325284 ZFINID:ZDB-GENE-030131-4009 Length:577 Species:Danio rerio


Alignment Length:620 Identity:366/620 - (59%)
Similarity:434/620 - (70%) Gaps:69/620 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AQENTEISTKFSTLNVNAVEFVPSFSYNSVVNVAEEAAAVVVAA----AAAEETADPGPASGSAT 63
            ||.:.::|...::|||:|..|||:..           |||.|.:    .:||.....||.:.:..
Zfish    19 AQVDVQLSKALTSLNVDAKPFVPNVH-----------AAVFVPSFQQKGSAETVESAGPDTDANV 72

  Fly    64 PATTPDSVGSGGSTAGAAPPPPTAQGAGAAAPSAQPPTSSSNSASPAPGSPATTPSAGAAAADPT 128
            ....|:           |||........|...:.:...|..:.|...||.||.            
Zfish    73 EVAEPE-----------APPMENGDAEMATDDTWEQKGSEPSEAEAEPGGPAR------------ 114

  Fly   129 PIDGLNPSDKIANNETDPADSWDVDDAVITPEDEEVEDAEFTEGEATPKVSKKKVVKVEENRSKR 193
              ||..|.:          ||         |::|.:|:.|        :|...|||..:.|..|:
Zfish   115 --DGGQPEE----------DS---------PQEEGMEEEE--------EVPTPKVVPTQPNAPKK 150

  Fly   194 EHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKG 258
            |||||||||||||||||||||||.|||||||||||||||||:||:||:|||||||||||||||||
Zfish   151 EHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKG 215

  Fly   259 KTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQTRE 323
            ||||||||:|||::||||||||||||||||||||||:||||||||||||||||||||::||||||
Zfish   216 KTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTRE 280

  Fly   324 HAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLSGY 388
            |||||||||||||:|||||||||||||...||.|||:|::|:|||:||||.||:.|||||||:|.
Zfish   281 HAMLAKTAGVKHLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPRKDVHFMPCSGLNGA 345

  Fly   389 GLKDQIPETLCPWYRGPAFIPFIDELPSLNRKSDGPFIMPIVDKYKDMGTVVMGKVESGTARKGQ 453
            .||:  |...||||.|..|||.:|.||:.||.||||..:||||||||||||::||:|||:..|.|
Zfish   346 NLKE--PAENCPWYTGLPFIPHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSIGKAQ 408

  Fly   454 NLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFVLCDAANPIKTGKIFDA 518
            .|::||||..|.|..|.||:.|....|||||:|::|||||||::.|||:||:|.|...||:.|||
Zfish   409 QLVMMPNRHTVEVLSLLSDEVETDEAGPGENLKLRLKGIEEEEILPGFILCNAENLCHTGRTFDA 473

  Fly   519 QVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLVDKKSGDKSKTRPRFVKQDQVAIMRIECS 583
            |:||:|||||||.||:||:|||...|||.:.|||||||||:||||||||||||||||.|.|:..:
Zfish   474 QIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRTA 538

  Fly   584 GMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVV 618
            |.||||.||.||||||||||||.||||||||||:|
Zfish   539 GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLV 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_001260415.1 PAM2 12..28 CDD:284542 7/15 (47%)
TEF1 191..619 CDD:227581 323/428 (75%)
EF1_alpha 197..416 CDD:206670 180/218 (83%)
eRF3_II 424..505 CDD:293906 48/80 (60%)
eRF3_C_III 511..617 CDD:294003 80/105 (76%)
gspt1lNP_942101.1 TEF1 150..572 CDD:227581 320/423 (76%)
EF1_alpha 154..370 CDD:206670 179/217 (82%)
eRF3_II 379..460 CDD:293906 48/80 (60%)
eRF3_C_III 466..572 CDD:294003 80/105 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 364 1.000 Domainoid score I890
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68226
Inparanoid 1 1.050 692 1.000 Inparanoid score I665
OMA 1 1.010 - - QHG54149
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0002347
OrthoInspector 1 1.000 - - otm26021
orthoMCL 1 0.900 - - OOG6_101550
Panther 1 1.100 - - LDO PTHR23115
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2104
SonicParanoid 1 1.000 - - X149
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1414.010

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