DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and GSPT1

DIOPT Version :9

Sequence 1:NP_001260415.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_002085.3 Gene:GSPT1 / 2935 HGNCID:4621 Length:637 Species:Homo sapiens


Alignment Length:642 Identity:375/642 - (58%)
Similarity:441/642 - (68%) Gaps:89/642 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAQENTEISTKFS-TLNVNAVEFVPSFSYNSVVNVAEEAAAVVVAAAAAEETADPGPASGSATPA 65
            |.:||  :|..|| .|||||..|||:      |:.||...:.:           .||        
Human    56 AQREN--LSAAFSRQLNVNAKPFVPN------VHAAEFVPSFL-----------RGP-------- 93

  Fly    66 TTPDSVGSGGSTAGAAPPPPTA-----QGAGAAAPS-AQPPTSSSNSASPAPGSPATTPSAGAAA 124
                          ||||||..     .|||:.|.. |.|..||....|...||     ::..:.
Human    94 --------------AAPPPPVGGAANNHGAGSGAGGRAAPVESSQEEQSLCEGS-----NSAVSM 139

  Fly   125 ADPTPIDGLNPSDKIANNETD--PADSWDVDDAVITPEDEEVEDAEFTEG--------------- 172
            ....||        :.|.||:  |.:||:        ..||:.:||...|               
Human   140 ELSEPI--------VENGETEMSPEESWE--------HKEEISEAEPGGGSLGDGRPPEESAHEM 188

  Fly   173 -EATPKVSKKKVVKVEENRSKREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREARE 236
             |...::.|.|.|.......|:|||||||||||||||||||||||.|||||||||||||||||:|
Human   189 MEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE 253

  Fly   237 KSRESWYLSWALDTNQEERDKGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAV 301
            |:||:|||||||||||||||||||||||||:|||::||||||||||||||||||||||:||||||
Human   254 KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV 318

  Fly   302 LVISARKGEFETGFDRGGQTREHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYL 366
            ||||||||||||||::|||||||||||||||||||:||:||||||||||...||.|||:|::|:|
Human   319 LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFL 383

  Fly   367 KKLGFNPAKDLTFMPCSGLSGYGLKDQIPETLCPWYRGPAFIPFIDELPSLNRKSDGPFIMPIVD 431
            ||:||||.||:.|||||||:|..||:|  ...||||.|..|||::|.||:.||..|||..:||||
Human   384 KKVGFNPKKDIHFMPCSGLTGANLKEQ--SDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVD 446

  Fly   432 KYKDMGTVVMGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEED 496
            |||||||||:||:|||:..|||.|::|||:..|.|..:.|||.|..:|.||||:||:|||||||:
Human   447 KYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEE 511

  Fly   497 VSPGFVLCDAANPIKTGKIFDAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLVDKKSGD 561
            :.|||:|||..|...:|:.||||:||:|||||||.||:||:|||...|||.:.|||||||||||:
Human   512 ILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGE 576

  Fly   562 KSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVV 618
            ||||||||||||||.|.|:..:|.||||.||.||||||||||||.||||||||||:|
Human   577 KSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLV 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_001260415.1 PAM2 12..28 CDD:284542 10/16 (63%)
TEF1 191..619 CDD:227581 322/428 (75%)
EF1_alpha 197..416 CDD:206670 179/218 (82%)
eRF3_II 424..505 CDD:293906 50/80 (63%)
eRF3_C_III 511..617 CDD:294003 79/105 (75%)
GSPT1NP_002085.3 PAM2 64..81 CDD:284542 10/22 (45%)
TEF1 210..634 CDD:227581 321/426 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 365 1.000 Domainoid score I935
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68226
Inparanoid 1 1.050 688 1.000 Inparanoid score I702
Isobase 1 0.950 - 0 Normalized mean entropy S365
OMA 1 1.010 - - QHG54149
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0002347
OrthoInspector 1 1.000 - - otm40644
orthoMCL 1 0.900 - - OOG6_101550
Panther 1 1.100 - - LDO PTHR23115
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2104
SonicParanoid 1 1.000 - - X149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

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