DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and tef102

DIOPT Version :10

Sequence 1:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_594440.1 Gene:tef102 / 2541984 PomBaseID:SPAC23A1.10 Length:460 Species:Schizosaccharomyces pombe


Alignment Length:443 Identity:173/443 - (39%)
Similarity:252/443 - (56%) Gaps:21/443 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 KREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERD 256
            ::.|:|||.|||||:||||..|.::...|.:||||:||:|:||.|..:.|:..:|.||..:.||:
pombe     4 EKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68

  Fly   257 KGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQT 321
            :|.|:::....|||.:.:.|::|||||:.|:.|||.|.:|||.|:|:|....||||.|..:.|||
pombe    69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQT 133

  Fly   322 REHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLS 386
            ||||:||.|.|||.|:|.|||||  |..|.|.|:.|...:...::||:|||| |.:.|:|.||..
pombe   134 REHALLAYTLGVKQLIVAVNKMD--TTGWSQARFEEIVKETSNFIKKVGFNP-KTVPFVPVSGFQ 195

  Fly   387 GYGLKDQIPETLCPWY------------RGPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMG 437
            |..:.:  |.|..|||            :|...:..||.:....|.:|.|..:|:.|.||  .:|
pombe   196 GDNMIE--PTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIG 258

  Fly   438 TVVMGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFV 502
            ||.:|:||:|..:.|..:...|......|..:......:.:..||:||...:|.:..:|:..|.|
pombe   259 TVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNV 323

  Fly   503 LCDAANPIKTG-KIFDAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLVDKKSGDKSKTR 566
            ..|:.|....| ..|.|||:||.|...|.||||.|:..|.|........||..:|::||.|.:..
pombe   324 CGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEES 388

  Fly   567 PRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            |:|||.....|.::..|..:|:|.|..:..:|||.:||..:|:|:| |:|.||
pombe   389 PKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVG-VIKAVE 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 102/230 (44%)
eRF3_II 424..505 CDD:293906 23/82 (28%)
eRF3_C_III 511..617 CDD:294003 40/106 (38%)
tef102NP_594440.1 PTZ00141 1..448 CDD:185474 173/443 (39%)
Blue background indicates that the domain is not in the aligned region.

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