DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and Eef1a2

DIOPT Version :10

Sequence 1:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_063139179.1 Gene:Eef1a2 / 24799 RGDID:3781 Length:490 Species:Rattus norvegicus


Alignment Length:448 Identity:169/448 - (37%)
Similarity:259/448 - (57%) Gaps:29/448 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 KREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERD 256
            ::.|:|:|.|||||:||||..|.::...|.:||||:||:|:||.|..:.|:..:|.||..:.||:
  Rat    31 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 95

  Fly   257 KGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQT 321
            :|.|:::....|||.:.:.||:|||||:.|:.|||.|.:|||.|||:::|..||||.|..:.|||
  Rat    96 RGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQT 160

  Fly   322 REHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLS 386
            ||||:||.|.|||.|:|.|||||.....:.:.||:|...::..|:||:|:||| .:.|:|.||..
  Rat   161 REHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPA-TVPFVPISGWH 224

  Fly   387 GYGLKDQIPETLCPWYR------------GPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMG 437
            |..:.:..|.  .||::            |.:.:..:|.:....|.:|.|..:|:.|.||  .:|
  Rat   225 GDNMLEPSPN--MPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIG 287

  Fly   438 TVVMGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFV 502
            ||.:|:||:|..|.|..:...|......|..:......::...||:||...:|.:..:|:..|.|
  Rat   288 TVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV 352

  Fly   503 LCDA-ANPIKTGKIFDAQVVILEHKSIICAGYSAVM-----HIHCAAEEVTVKALICLVDKKSGD 561
            ..|: |:|.:....|.:||:||.|...|.||||.|:     ||.|...|:..|     :|::||.
  Rat   353 CGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEK-----IDRRSGK 412

  Fly   562 KSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            |.:..|:.:|....||:.:.....:|:|.|..:|.:|||.:||..:|:|:| |:|.||
  Rat   413 KLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVG-VIKNVE 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 98/230 (43%)
eRF3_II 424..505 CDD:293906 24/82 (29%)
eRF3_C_III 511..617 CDD:294003 38/110 (35%)
Eef1a2XP_063139179.1 None
Blue background indicates that the domain is not in the aligned region.

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