DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and Eef1a1l1

DIOPT Version :10

Sequence 1:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_038956056.1 Gene:Eef1a1l1 / 100360413 RGDID:2322143 Length:462 Species:Rattus norvegicus


Alignment Length:449 Identity:169/449 - (37%)
Similarity:257/449 - (57%) Gaps:31/449 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 KREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERD 256
            ::.|:|:|.|||||:||||..|.::...|.:||||:||:|:||.|..:.|...:|.||..:.||:
  Rat     4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSLKYAWVLDKLKAERE 68

  Fly   257 KGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQT 321
            :|.|:::....|||.:.:.||:|||||:.|:.|||.|.:|||.|||:::|..||||.|..:.|||
  Rat    69 RGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQT 133

  Fly   322 REHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLS 386
            ||||:||.|.|||.|:|.|||||.....:.|.||.|...::..|:||:|:|| ..:.|:|.||.:
  Rat   134 REHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNP-DTVAFVPISGWN 197

  Fly   387 GYGLKDQIPETLCPWYR------------GPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMG 437
            |..:.:  |....||::            |...:..:|.:....|.:|.|..:|:.|.||  .:|
  Rat   198 GDNMLE--PSANMPWFKGWKVTRKDGSASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIG 260

  Fly   438 TVVMGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFV 502
            ||.:|:||:|..:.|..:...|......|..:......::...||:||...:|.:..:||..|.|
  Rat   261 TVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325

  Fly   503 LCDAAN--PIKTGKIFDAQVVILEHKSIICAGYSAVM-----HIHCAAEEVTVKALICLVDKKSG 560
            ..|:.|  |::... |.|||:||.|...|.|||:.|:     ||.|...|:..|     :|::||
  Rat   326 AGDSKNDPPMEVAG-FTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEK-----IDRRSG 384

  Fly   561 DKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKVVE 619
            .|.:..|:|:|....||:.:.....:|:|.|..:|.:|||.:||..:|:|:| |:|.|:
  Rat   385 KKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVG-VIKAVD 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 98/230 (43%)
eRF3_II 424..505 CDD:293906 24/82 (29%)
eRF3_C_III 511..617 CDD:294003 39/110 (35%)
Eef1a1l1XP_038956056.1 PTZ00141 1..460 CDD:185474 169/449 (38%)
Blue background indicates that the domain is not in the aligned region.

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