DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF3 and hbs1l

DIOPT Version :10

Sequence 1:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_012818243.1 Gene:hbs1l / 100170572 XenbaseID:XB-GENE-944105 Length:677 Species:Xenopus tropicalis


Alignment Length:527 Identity:195/527 - (37%)
Similarity:293/527 - (55%) Gaps:34/527 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 PPTSSSNSASPAPGSPATTPSAGAAAADPTPIDGLNPSDKIANNETDPADSWDVDDAVITPEDEE 163
            |..||..:.....|.   |.......||    :||..::.|.:::.....|     :::||    
 Frog   179 PSVSSEINGQSVKGQ---TNEEAMEEAD----NGLQSANPIPSSQNTEEHS-----SIMTP---- 227

  Fly   164 VEDAEFTEGEATPKVSKKKVVKVE-ENRSKREH-VNVVFIGHVDAGKSTIGGQIMSLTGMVDKRT 226
                    |:::.|..:|..:|.| |.|...:| :|:|.||||||||||:.|.::.|.|.|:|||
 Frog   228 --------GKSSNKAKQKINIKEELEKRQGGKHLLNLVVIGHVDAGKSTLMGHLLYLLGHVNKRT 284

  Fly   227 LEKYEREAREKSRESWYLSWALDTNQEERDKGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMI 291
            :.|||:|:::..:.|:..:|.||...|||.:|.|::||...|||..|..|::||||||.|:||||
 Frog   285 MHKYEQESKKAGKASFAYAWVLDETGEERQRGVTMDVGMTKFETKSKVITLMDAPGHKDFIPNMI 349

  Fly   292 GGAAQADLAVLVISARKGEFETGFDRGGQTREHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYN 356
            .||||||:|||.:.|.:||||.||:.||||||||:|.::.||..|.|.|||||.  |||.|.|:|
 Frog   350 TGAAQADVAVLAVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQ--VNWQQERFN 412

  Fly   357 ECKDKILPYLKKLGFNPAKDLTFMPCSGLSGYGL--KDQIPETLCPWYRGPAFIPFIDELPSLNR 419
            |...|:..:||:.||..: |:.::|.|||||..|  :.||.| |..||:||..:..||...:..|
 Frog   413 EVTSKLGHFLKQAGFKES-DVYYIPTSGLSGENLVKRSQISE-LINWYKGPCLLEQIDYFKAPQR 475

  Fly   420 KSDGPFIMPIVDKYKDMGT--VVMGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPG 482
            ..|.||.:...|.:||.|:  .|.||:|:|..:.|..||.||......|..:...:..|.....|
 Frog   476 SVDKPFRLCTSDVFKDQGSGFCVTGKIEAGFVQTGDRLLAMPPHETCTVKGITLHEEAVDWAAAG 540

  Fly   483 ENVKIKLKGIEEEDVSPGFVLCDAANPIKTGKIFDAQVVILEHKSIICAGYSAVMHIHCAAEEVT 547
            ::|.:.|.|::...::.|.|.|....|||....|.|:|:|...:..|..|:..::|....:|..|
 Frog   541 DHVSLTLTGMDIIKINVGCVFCSPNEPIKACTRFRARVLIFNFEVPITQGFPVLIHYQTVSEPAT 605

  Fly   548 VKALICLVDKKSGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIG 612
            ::.|:.::.|.:|:..|.:|:.:.:...|::.::....|.||.:|.|.::|||.||....:||.|
 Frog   606 IRKLVSVLHKSTGEVMKKKPKCLTKGMNAVIELQTQRPIALELYKDFKELGRFMLRYSGSSIAAG 670

  Fly   613 KVLKVVE 619
            .|.::.|
 Frog   671 VVTEIKE 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 114/220 (52%)
eRF3_II 424..505 CDD:293906 24/82 (29%)
eRF3_C_III 511..617 CDD:294003 30/105 (29%)
hbs1lXP_012818243.1 HBS1_N 70..130 CDD:462642
TEF1 254..677 CDD:444074 173/426 (41%)
Blue background indicates that the domain is not in the aligned region.

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