DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6388 and trm-1

DIOPT Version :9

Sequence 1:NP_609566.1 Gene:CG6388 / 34656 FlyBaseID:FBgn0032430 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001379156.1 Gene:trm-1 / 179920 WormBaseID:WBGene00006613 Length:526 Species:Caenorhabditis elegans


Alignment Length:532 Identity:235/532 - (44%)
Similarity:320/532 - (60%) Gaps:41/532 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EEKPQIIAENPNENVIRERNAEIVSGGNVFYNPVQEFNRDLSIAALNVYRQRLTKERSEKALKKQ 69
            |:|.::       .||:|..|::...|.|||||||||||||::..|..:.            ...
 Worm    16 EDKEEV-------TVIQEGQAKVGFHGPVFYNPVQEFNRDLTVTVLRQFS------------ADH 61

  Fly    70 RKKVKEQEDEKTTPVPEDPPVYEAGTRY-EDG-LRILEALAATGLRSIRYAQEIAGVRQIVANDL 132
            :|..:||:..||   .|:||..:..... ||| :|||:||:|:|||::|:::|:..|..|:|||.
 Worm    62 QKWAEEQKQLKT---EEEPPKKKNKLAINEDGKIRILDALSASGLRALRFSKEVPNVGFIMANDF 123

  Fly   133 SRQAVASINTNIRHNKVEELIEPSHSDAMTLMYLSTQPEKRFDAVDLDPYGCPNRFLDGAMQCLV 197
            |..|||||..|::.|.||:::|....||:..|......:|||.||||||||..:.|||.|:||:.
 Worm   124 SDNAVASIQENVKLNGVEDIVEAHFGDAVMTMMEHRGIDKRFHAVDLDPYGTASTFLDSAVQCVA 188

  Fly   198 DGGLLLVTATDMAVLAGNAPEACYVKYGSVPLRMKCCHEMALRILLHCIESHANRYGKYIEPLLS 262
            |.|:|:||.||||||.||.|||||.||.:|..|||||||:.|||||..|:|.||||.:|||||:|
 Worm   189 DRGILMVTCTDMAVLCGNTPEACYNKYDAVTTRMKCCHEVGLRILLRAIDSAANRYTRYIEPLVS 253

  Fly   263 ISADFYIRIFVRVYVGQAQCKLSMSKQSWIYQCTGCETFTLQPLGITKPNPTAGNPQQLKFGIPT 327
            ||.|||:|:||||:.|..|.|.|.:|...:..|:||.  :::||.:.|..  .|| ||.|:.|||
 Worm   254 ISVDFYVRVFVRVHTGAFQAKQSGTKVGTVLVCSGCH--SMEPLVLLKRG--EGN-QQSKYSIPT 313

  Fly   328 ------GPAVNSQCEHCGHRHHLGGPIWSAPIHNPEFVQDLLTAVQET-TLQSLGTQRRIVGVLS 385
                  ||  .::|.||....|..|||:.||||:..||..||..::.| ..:.|||..|:.|||:
 Worm   314 VRHSISGP--GNRCIHCLLPLHQIGPIYLAPIHSKPFVTSLLERLKSTPEAERLGTHGRLQGVLT 376

  Fly   386 MVQEELQDVPLYYTPDKLCCVLKLEIVPMLKFRSAILHAGYRVSYSHASKNSLKTNAPPAVLWDI 450
            ||.|||.|| |||..:::..|:|:.:......|||||:||::||.||.:..::|||||..:||||
 Worm   377 MVNEELDDV-LYYEHNQMANVVKVSVPKSQSVRSAILNAGFKVSGSHCNPRAIKTNAPMHLLWDI 440

  Fly   451 LRSWSKRHPVNPE-RMIPGSPLAAILSKECTAVYEFDELHPEANPKSRKSALSRFQENPTPHWGP 514
            .|..:|...|:.| |:...|....||.:..|....| .|||.|..:::|..|.|||.|...:|||
 Worm   441 YRQVAKDTSVDREKRLAKESAGYHILGQPITNTVNF-TLHPGAIEQAKKENLVRFQCNKGKNWGP 504

  Fly   515 GTRATIMIGDNK 526
            ..:|...:...|
 Worm   505 RQKAKGSVNSTK 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6388NP_609566.1 AdoMet_MTases 17..452 CDD:302624 208/443 (47%)
DUF1764 <58..>103 CDD:285744 11/46 (24%)
trm-1NP_001379156.1 TRM 9..442 CDD:396545 210/455 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 350 1.000 Domainoid score I538
eggNOG 1 0.900 - - E1_COG1867
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5632
Inparanoid 1 1.050 379 1.000 Inparanoid score I1196
Isobase 1 0.950 - 0 Normalized mean entropy S1305
OMA 1 1.010 - - QHG54291
OrthoDB 1 1.010 - - D1414511at2759
OrthoFinder 1 1.000 - - FOG0003425
OrthoInspector 1 1.000 - - oto18434
orthoMCL 1 0.900 - - OOG6_101071
Panther 1 1.100 - - LDO PTHR10631
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1547
SonicParanoid 1 1.000 - - X2318
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.860

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