DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkd2 and PKD2L2

DIOPT Version :9

Sequence 1:NP_609561.2 Gene:Pkd2 / 34651 FlyBaseID:FBgn0041195 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_001287850.1 Gene:PKD2L2 / 27039 HGNCID:9012 Length:624 Species:Homo sapiens


Alignment Length:739 Identity:209/739 - (28%)
Similarity:331/739 - (44%) Gaps:156/739 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 SRGHRAPSIIAASALQNRAKTNRILYTTDEEVREALVEFSVFIIFLILTSLVVLSVRHTYMFYFN 267
            ||.||           ..|..:::.|..:.|:...|.|..::.||||...::...:.:.:|:|.|
Human     5 SRWHR-----------GGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLN 58

  Fly   268 DTMKKLFTNREMVVAPSVTVGFEKLITVPDWWDYLKYNFLVTLHGDLTFMDDAQANLTSMPPEGS 332
            ..|..||.:..  |.......|:.:.::.|:|.::                              
Human    59 KVMSSLFLDTS--VPGEERTNFKSIRSITDFWKFM------------------------------ 91

  Fly   333 EQGSEQGSEQGSEQSPEEVVGEAPEEAPEMDRLQEDFKYNGNPYIDLRGHRRAKRQSGVDGNSED 397
                                     |.|.::.|..|..||.....:|:...|             
Human    92 -------------------------EGPLLEGLYWDSWYNNQQLYNLKNSSR------------- 118

  Fly   398 GSEDVSGNYLKDDSDSIQANMSFHHLEGRVFLYENLLLGPPRLRQIRVRKESCYVNDAFIRYFNT 462
                                          ..|||:|||.||:||::||..:|.|..:|....:.
Human   119 ------------------------------IYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMSE 153

  Fly   463 CYAAYSSGAEDRK--PMHKGSPFRTMHDLDSTP-IWTVLAFYRTGGYTVNLDYDKDRNVKIINDL 524
            ||..|:|..||..  .:...:.:|......::| .|..|..||.|||...|...|........||
Human   154 CYGKYTSANEDLSNFGLQINTEWRYSTSNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDL 218

  Fly   525 KDIHWLDRGSRLCLVEFNLFNENTDIFQSIKLIAEIPPTGGVIPQAHLQTVKMYSFFTDRSMLMT 589
            :...|:.||:|:..::|:|:|.|.::|..|:|:||.|.|||::......:||:..:.:.....:.
Human   219 RLNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIA 283

  Fly   590 VIYIFWYIMVIYYTIYEITEIR--KSGIKIYFCSMLNILDCAILLGCYLALVYNIWHSFKVMSLT 652
            ...|.:.|.:..:|..|:.:|:  ||.   ||.|:.|.|:..:||.|::|:.:|.:::.::..|.
Human   284 SCEITFCIFLFVFTTQEVKKIKEFKSA---YFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLL 345

  Fly   653 AR-AHSDVTYQSLDVLCFWNIIYVDMMAILAFLVWIKIFKFISFNKTLVQFTTTLKRCSKDLAGF 716
            .: ..|...|.....|..|:|.|.:::||..|..|||||||||||||:.|.::||.||.||:.||
Human   346 GQLLKSTEKYSDFYFLACWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGF 410

  Fly   717 SLMFGIVFLAYAQLGLLLFGTKHPDFRNFITSILTMIRMILGDFQYNLIEQANRVLGPIYFLTYI 781
            ::||.|:|.||||||.|:||::..||..|..||....|::||||.:..|:|||.:||||||:|:|
Human   411 AIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANPILGPIYFITFI 475

  Fly   782 LLVFFILLNMFLAIIMETYNTVKGEITQGRS---HLGSYIYRKLSGMLYWITHCGRKRRHHPQAS 843
            ..|||:|||||||||.:||:.||.:.:.||.   .||..|.:....:|        ::....:|.
Human   476 FFVFFVLLNMFLAIINDTYSEVKADYSIGRRLDFELGKMIKQSYKNVL--------EKFRLKKAQ 532

  Fly   844 ETEDKD-------AEHDVGAAHDE-----THEIRKNMTPAEQQYFKDIPQGENQDMVRLNNRVGL 896
            :.|||.       ||.......||     ..:::|.....|::|:....|.:.|.:.:       
Human   533 KDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQ------- 590

  Fly   897 LEEILEKLINNMDDILKRVEKDYH 920
             ||..|..:..::     :||:.|
Human   591 -EEFRELFLYAVE-----LEKELH 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkd2NP_609561.2 PKD_channel 402..803 CDD:285288 151/406 (37%)
PKD2L2NP_001287850.1 PKD_channel 76..497 CDD:332708 162/521 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151827
Domainoid 1 1.000 307 1.000 Domainoid score I1352
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I2268
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D205541at33208
OrthoFinder 1 1.000 - - FOG0002518
OrthoInspector 1 1.000 - - otm40667
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10877
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1653
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.860

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