DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkd2 and PKD1L1

DIOPT Version :9

Sequence 1:NP_609561.2 Gene:Pkd2 / 34651 FlyBaseID:FBgn0041195 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_016867287.1 Gene:PKD1L1 / 168507 HGNCID:18053 Length:2920 Species:Homo sapiens


Alignment Length:852 Identity:156/852 - (18%)
Similarity:270/852 - (31%) Gaps:324/852 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 VSTRESGRITFQEAA--PSTSAKVVKLAASEP-----RPAKPPEKEGFSLFKRKKKSVGSSTPPS 201
            ::.|...|:.|..:.  |..:.:|.|:.|:..     |.|.||.|                   :
Human  2279 LAERSWTRLPFSSSCSIPDCAGEVEKVLAARQQARHLRWAHPPSK-------------------A 2324

  Fly   202 PSRGHRAPSIIAASALQNRAKTNRILYTTDEEVREALVEFSVFIIFLILTSLVVLSVRHTYMFYF 266
            ..||.|          |...:.:|        .|.||.:.|:.|:.|:|...|:........:..
Human  2325 QLRGTR----------QRMRRESR--------TRAALRDISMDILMLLLLLCVIYGRFSQDEYSL 2371

  Fly   267 NDTMKKLFTNREMVVAPSVTVGFEKLITVPDWWDYLKYNFLVTLHGDLTFMDDAQANLTSMPPEG 331
            |..::|.||..    |.:...|   |..:.||||:    .|.||             |..:.|.|
Human  2372 NQAIRKEFTRN----ARNCLGG---LRNIADWWDW----SLTTL-------------LDGLYPGG 2412

  Fly   332 SEQGSEQGSEQGSEQSPEEVVGEAPEEAPEMDRLQEDFKYNGNPYIDLRGHRRAKRQSGVDGNSE 396
            :......|::.|:                                                    
Human  2413 TPSARVPGAQPGA---------------------------------------------------- 2425

  Fly   397 DGSEDVSGNYLKDDSDSIQANMSFHHLEGRVFLYENLLLGPPRLRQIRVRKESCYVNDAFIRYFN 461
                                      |.|:.:     |:|...:||::|          |.|:. 
Human  2426 --------------------------LGGKCY-----LIGSSVIRQLKV----------FPRHL- 2448

  Fly   462 TCYAAYSSGAEDRKPMHKGSPFRTMHDLDSTPIWTVLAFYRTGG----YTVNLDYDKDRNVKI-- 520
             |           ||..   ||..:.: ||.|..:.    ..||    |.::   .:::||.:  
Human  2449 -C-----------KPPR---PFSALIE-DSIPTCSP----EVGGPENPYLID---PENQNVTLNG 2490

  Fly   521 ------------------------INDLKDIHWLDRGSRLCLVEFNLFNENTDIFQSIKLIAEIP 561
                                    ::.|:...|:||.:|...|.|.|:|..|.:|.|:.|..||.
Human  2491 PGGCGTREDCVLSLGRTRTEAHTALSRLRASMWIDRSTRAVSVHFTLYNPPTQLFTSVSLRVEIL 2555

  Fly   562 PTGGVIPQAHLQTVKMYSFFTDRSM----LMTVIYIFWYIMVIYYTIYEITEIRKSGIKIYFCSM 622
            |||.::|.:   .|:.:|.|...|.    ||....:|..:.:|:..: ::..:...|:..|:...
Human  2556 PTGSLVPSS---LVESFSIFRSDSALQYHLMLPQLVFLALSLIHLCV-QLYRMMDKGVLSYWRKP 2616

  Fly   623 LNILDCAILLGCYLALVYNIWHSFKVMSLTARAHSDVT----------YQSLDVLCFWNIIYVDM 677
            .|.|:.:::   .::|.|     :.|.........|||          :..|.::..||.....:
Human  2617 RNWLELSVV---GVSLTY-----YAVSGHLVTLAGDVTNQFHRGLCRAFMDLTLMASWNQRARWL 2673

  Fly   678 MAILAFLVWIKIFKFISFNKTLVQFTTTLKRCSKDLAGFSLMFGIVFLAYAQLGLLLF------- 735
            ..||.||..:|.........|:...::.::.....:....|:..::..|.:.|...|.       
Human  2674 RGILLFLFTLKCVYLPGIQNTMASCSSMMRHSLPSIFVAGLVGALMLAALSHLHRFLLSMWVLPP 2738

  Fly   736 GTKHPDFRNFITSILTMIRMILGDFQYNLIEQANRVLG---------PIYFLTYILLVF-----F 786
            ||    |.:....:|         |.:....|.:.:||         ..||  .|||:.     |
Human  2739 GT----FTDAFPGLL---------FHFPRRSQKDCLLGLSKSDQRAMACYF--GILLIVSATLCF 2788

  Fly   787 ILLNMFLAIIMETYNTVKGEITQGRSHLGSYIYRKLSGMLYWITHCGRKRRHHPQASETEDKDAE 851
            .:|..||..:.:...:.:.:.......:.:|::.|:...|         |...|:..|.|     
Human  2789 GMLRGFLMTLPQKRKSFQSKSFVRLKDVTAYMWEKVLTFL---------RLETPKLEEAE----- 2839

  Fly   852 HDVGAAHDETHEIRKNMTPAEQQYFKDIPQGENQDMVRLNNRVGLLEEILEKLINNMDDILK--R 914
                  ..|.|           .|:             |:....||:|:|.| ||.:.|.|:  .
Human  2840 ------MVENH-----------NYY-------------LDEFANLLDELLMK-INGLSDSLQLPL 2873

  Fly   915 VEKDYHN 921
            :||..:|
Human  2874 LEKTSNN 2880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkd2NP_609561.2 PKD_channel 402..803 CDD:285288 89/465 (19%)
PKD1L1XP_016867287.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151824
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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