DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17010 and Rbks

DIOPT Version :10

Sequence 1:NP_609560.2 Gene:CG17010 / 34650 FlyBaseID:FBgn0032424 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001102173.1 Gene:Rbks / 362706 RGDID:1310064 Length:323 Species:Rattus norvegicus


Alignment Length:301 Identity:109/301 - (36%)
Similarity:168/301 - (55%) Gaps:6/301 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVVFGTANIEYITYVPELPKPGELVAGTYMETCFGGKGANQCVAAAKLGASTVLVAKLGKDESGD 71
            |||.|:...:.::....|||.||.:.|......||||||||||.||:|||...:|.|:|.|..|:
  Rat    19 VVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAKAAMVCKVGNDSFGN 83

  Fly    72 DYLNHLQQHEVDVTHVQQVENNPTGMSEIAVSENGDQYKINVAGANVFLTAKDVTRAKKSFQDAK 136
            :|:.:|:|:.:......|..:..||.:.|.|:..|....:.|||||:.|..:|:.:|......||
  Rat    84 NYIENLKQNHISTEFTYQTRDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLKKAAHVISRAK 148

  Fly   137 VLLCQLETDMNATMCALRQFK--GV-SLLHMSPMRKDIPNAMIGLPTILVANQEAAANLTDMEEV 198
            |::||||....|::.||...:  || :|.:.:|...|:......|.|:...|:..|..||. ..|
  Rat   149 VMICQLEISPAASLEALTMARSSGVKTLFNPAPAIADLDPRFYTLSTVFCCNESEAEILTG-HAV 212

  Fly   199 LTPDQARKAAETLIAKGAKSVIITMGEQGAVYMSKKSKDMCTHVPASDVPHLADPSGAGDAFMGS 263
            ..|..|..||..|:.:|.:.|:||:|..|.|.:| :::.:..|:|...| ...|.:||||:|:|:
  Rat   213 NDPTTAGTAALVLLERGCQVVVITLGASGCVTLS-QAEPVPKHIPTEAV-KAVDTTGAGDSFVGA 275

  Fly   264 LAYHIARFPKLSTEHHISAAHSCAAYSMGRRGTQPSFPGKE 304
            ||:::|.:|.||.|..:..::|.||.|:...|||.|:|.|:
  Rat   276 LAFYLAYYPSLSLEEMLKRSNSIAAVSVQATGTQSSYPYKK 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17010NP_609560.2 ribokinase 6..301 CDD:238579 107/296 (36%)
RbksNP_001102173.1 D_ribokin_bact 23..319 CDD:274000 106/297 (36%)

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