DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru1 and AT2G47310

DIOPT Version :10

Sequence 1:NP_723737.1 Gene:bru1 / 34648 FlyBaseID:FBgn0000114 Length:810 Species:Drosophila melanogaster
Sequence 2:NP_850472.1 Gene:AT2G47310 / 819344 AraportID:AT2G47310 Length:512 Species:Arabidopsis thaliana


Alignment Length:407 Identity:97/407 - (23%)
Similarity:162/407 - (39%) Gaps:105/407 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 ATNSLPNSP-----IHSNNNNPSLLNNNNNNSNGTSSNNSLNVG------NNN-----SNPSLGG 293
            |.|:.|.:|     .|:|.|||.   ::..:......::...||      |:|     :.|...|
plant     5 APNAFPGAPPPVPYYHNNYNNPP---HHQIHPPPPPHHHIAAVGFHKYPQNDNRDQRFNQPHYSG 66

  Fly   294 SNSNALVSVGSNGIMSAAGLVNNNN-------NPCSAN----RNVVAMVDDDACFRLDTDATVTY 347
            ...|.:|.             .:||       :||..:    |...:..|       :.|.::. 
plant    67 QQQNMIVD-------------QSNNAPPPFPPSPCGGSSLRKRRSQSATD-------NADGSIA- 110

  Fly   348 GEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAAL 412
                      |::|..:.|:..|..:|::||:||.|..|.:.:||.||.....||:.:.......
plant   111 ----------KLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEEGN 165

  Fly   413 KAQDALHNVKTLNGMYHPIQMKPADSENR----------NERKLFVGMLNKKLNENDVRKLFEVH 467
            .|..||....|..|...|::::.|::|..          :..||:|..|||:..:.:|.::|..:
plant   166 AAIAALTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNKQTTKMEVNEVFSRY 230

  Fly   468 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQK 532
            |.||:..:..|.....:|.|||.|:.|..|::||| .|:....:.|...||:|:|||.:|.:   
plant   231 GIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIK-ALNGLFTIRGSDQPLIVRFADPKKPR--- 291

  Fly   533 KIQQIQANLWNLASNINIPLGQTATSVTTP-----ILPNPPQQPSPVLGADAITPASIQLLQ--- 589
                               ||:..::..||     ..||...||.|..  :...||..:::|   
plant   292 -------------------LGEQRSTFNTPPAMQHFDPNWHSQPYPQW--ENKEPAPPRVVQHHD 335

  Fly   590 -QLQAVGLQHQLLQALT 605
             ..|.....||..||::
plant   336 FSSQPNHFPHQNTQAVS 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru1NP_723737.1 RRM1_CELF1_2_Bruno 356..437 CDD:410040 23/80 (29%)
SF-CC1 <435..789 CDD:273721 50/190 (26%)
RRM_SF 443..524 CDD:473069 28/80 (35%)
RRM3_Bruno_like 722..800 CDD:241084
AT2G47310NP_850472.1 RRM_SF 111..190 CDD:473069 23/78 (29%)
RRM_SF 208..287 CDD:473069 29/79 (37%)
WW 406..432 CDD:459800
Blue background indicates that the domain is not in the aligned region.

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