DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru1 and celf6

DIOPT Version :10

Sequence 1:NP_723737.1 Gene:bru1 / 34648 FlyBaseID:FBgn0000114 Length:810 Species:Drosophila melanogaster
Sequence 2:XP_073786236.1 Gene:celf6 / 794913 ZFINID:ZDB-GENE-120215-101 Length:473 Species:Danio rerio


Alignment Length:470 Identity:212/470 - (45%)
Similarity:286/470 - (60%) Gaps:38/470 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 DPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDA 417
            |.|.||:|:||:|::::|..|:.:|||:|.::.:.||:|:.||:.|||.|:|:..|.:|||||.|
Zfish    30 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 94

  Fly   418 LHNVKTLNGMYHPIQMKPADSENR-NERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNG 481
            ||..|||.||..|||:||||||.| .|||||||||.|:..|.|||.|||..|.||||||||..:|
Zfish    95 LHEQKTLPGMNRPIQVKPADSEGRGEERKLFVGMLGKQQCEEDVRCLFEAFGQIEECTVLRGPDG 159

  Fly   482 QSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLAS 546
            .|||||||.|:: ||...|...:|...:.|.|.:|.||||||||.||:..:::.|:...| .:.|
Zfish   160 ASKGCAFVKFSS-HAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRMHQMAGQL-GIFS 222

  Fly   547 NINIPLGQTATSVTTPILPNPPQQPSPVLGADA--ITP----ASIQLLQQLQAVGLQHQLLQALT 605
            .:::..|.........::....||.:.:....:  :.|    |:.| :||:.|..|...|...:|
Zfish   223 PMSVQFGAYGAYTHAQMIQQQQQQAALMAATQSSYLNPMAALAAAQ-MQQIAAFNLNGLLAAPMT 286

  Fly   606 GLGAQQSSSATDTSAVAAAGLLTPMTVQNLAAIAAMTQPSLSNAAAAAAA----ATSPGSAQLTN 666
                 .||.::....::.:| |:.|.|...:|:||.     ||...|:..    ...|..||...
Zfish   287 -----PSSGSSTPPGISGSG-LSSMGVNGFSALAAQ-----SNGQPASETLYTNGIHPYPAQSPT 340

  Fly   667 TAALLWSDPNPMASAYMSTAAGLPQFGSASALSTSPLASVALSAAAAAAAGKQIEGPEGCNLFIY 731
            .|       :|:..||    ||:..:.:|...:.:|: |.|.:........:|.|||||||||||
Zfish   341 VA-------DPLQQAY----AGVQHYAAAYPTAYAPI-SQAFAQQPPIIPQQQREGPEGCNLFIY 393

  Fly   732 HLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKR 796
            ||||||.|.:|...|||||||||||||:|:.|:.||||||||||||.|||.||:||||||:|.||
Zfish   394 HLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMNGFQIGMKR 458

  Fly   797 LKVQLKKPKD-SKPY 810
            ||||||:||| ::||
Zfish   459 LKVQLKRPKDANRPY 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru1NP_723737.1 RRM1_CELF1_2_Bruno 356..437 CDD:410040 41/80 (51%)
SF-CC1 <435..789 CDD:273721 152/364 (42%)
RRM_SF 443..524 CDD:473069 47/80 (59%)
RRM3_Bruno_like 722..800 CDD:241084 61/77 (79%)
celf6XP_073786236.1 None

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