DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru1 and celf1

DIOPT Version :10

Sequence 1:NP_723737.1 Gene:bru1 / 34648 FlyBaseID:FBgn0000114 Length:810 Species:Drosophila melanogaster
Sequence 2:XP_009301603.1 Gene:celf1 / 58137 ZFINID:ZDB-GENE-000501-1 Length:546 Species:Danio rerio


Alignment Length:561 Identity:258/561 - (45%)
Similarity:320/561 - (57%) Gaps:163/561 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 EPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATG--ISKGCCFVTFYTRHAALK 413
            :||.|:|||||||:|::..|.||||:||.||||:.||||||::..  .||||||||:|||.:||:
Zfish    48 QPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALE 112

  Fly   414 AQDALHNVKTLNGMYHPIQMKPADSENRN---ERKLFVGMLNKKLNENDVRKLFEVHGAIEECTV 475
            ||:||||:|.|.||:|||||||||||..|   :|||||||::||.||||:|.:|..:|.||||.:
Zfish   113 AQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEECRI 177

  Fly   476 LRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI-QQIQ- 538
            ||..:|.|:|||||||..:..|.|||| ::.|::.||||:||:|||||||||:||||:| ||:| 
Zfish   178 LRGPDGLSRGCAFVTFTARQMAQSAIK-SMHQSQTMEGCSSPIVVKFADTQKDKEQKRIAQQLQQ 241

  Fly   539 -------ANLWNLASNINIPLGQTATSVTTPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGL 596
                   |::|...:.:| .||              ||..:..|          |||||..:.|.
Zfish   242 QMQQLNAASMWGNLTGLN-SLG--------------PQYLALYL----------QLLQQSASSGN 281

  Fly   597 QHQLLQALTGLGAQQSSSATDTSAVAAAGLLTPMTVQNLAAIAAMTQPSLSNAAAAAAAATSPGS 661
            ....|..::||.|                      :|||||:|         |||:|..||..||
Zfish   282 ALNNLHPMSGLNA----------------------MQNLAALA---------AAASATQATPTGS 315

  Fly   662 AQLTNTAALL-----------------W--------------SDPNPMAS--AYMSTAAGLPQFG 693
            :.||.:::.|                 |              |..|||||  |..|.||     |
Zfish   316 SALTTSSSPLSVLTSSGTPSGQPAQSAWDAYKAGSSPTSSTSSSVNPMASLGALQSLAA-----G 375

  Fly   694 SASALSTSPLASVA----------LS---------------------AAAA-------------- 713
            :.:.|:.|.|||:|          ||                     ||||              
Zfish   376 AGAGLNMSSLASMAALNGGLGSGGLSNGSGSTMEALTQAAYSGIQQYAAAALPSLYSQSLLSQQN 440

  Fly   714 -AAAGKQIE-------GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFG 770
             :|||.|.|       ||||.|||||||||||.|.||...|:||||||||||||||||:||||||
Zfish   441 VSAAGSQKEASLNQSVGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFG 505

  Fly   771 FVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPK-DSKPY 810
            |||:|||.|:|.||::|||||:|.||||||||:.| |||||
Zfish   506 FVSYDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru1NP_723737.1 RRM1_CELF1_2_Bruno 356..437 CDD:410040 55/82 (67%)
SF-CC1 <435..789 CDD:273721 182/451 (40%)
RRM_SF 443..524 CDD:473069 47/80 (59%)
RRM3_Bruno_like 722..800 CDD:241084 61/77 (79%)
celf1XP_009301603.1 RRM1_CELF1_2_Bruno 53..136 CDD:410040 55/82 (67%)
RRM2_CELF1_2 145..225 CDD:410042 47/80 (59%)
RRM3_CELF1_2 454..545 CDD:241082 68/90 (76%)

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